Rhagoletis zephyria (snowberry fruit fly): 108375134
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Entry
108375134 CDS
T08513
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108375134
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108375134
Factors involved in mRNA localization
Other mRNA localization factors
108375134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Pecanex_C
Motif
Other DBs
NCBI-GeneID:
108375134
NCBI-ProteinID:
XP_017486713
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MAQAQDVAQERVTLSDAISNVDVLDELELPDSQPCIAGENWSIVYHVNFDTNFEDRNAFV
CGVAKYIEEATVQCHLNVMLDEGEKHAVMLYTWRCCSRAIPQPKSNEQPNRRDLYEKIVE
VLGPEKAAIERFCFEVKRLCHDSKKKAGTTFVSEAYLLTLGKFINMFAVLDELKNMKSSV
KNDYATYRRAAQFLKVLSDSESLQESQSLSMFLALQNKIRDNLKESLESISGYEELFCDL
VNLFTNMYECKQFVLPSEKHMLVKVIGFTLYLMDGENCNINKLDAKRRISLARIDRIFKA
LEMVPLYGDMQIAPFQTYIKRCAHFDANKWPTCSNQTTNSYQSDILQYLPSIRDDYVVFI
AELSRHSNEVTTTVKDAPRSDAENRELLKLALKGIQLLADWTAHVTELYSWKLMHPTDPH
QNNLCPAEAEEYERATRYNYSSDEKYALIELVAMVKGLQVLMNRMEAVFVDAIRRAIYAD
LQDFVQITLKEPLRKAVKNKKDVVRTMISSVRDTCADYMRGFDEHRVVAGGRGGNMEVEV
KVPRRNVGPSTTQLYMIRTQLESLISDKALSGRRTLRKDIDGQYLIAIDQFHKHSFFWSY
LLNFSQTLRECCDLSQLWYREFYLEMTMGKRIQFPIEMSLPWILIDQILTDKDASMMECI
LYPLDLYNDSAHYALTKFKKQFLYDEVEAEVNLCFDQFVYKLSEQIFSYYKQMAASITLD
KRFRTDLATLGVNFPWPSSNRYETLLKQRHLQLLGRMIDLERLIAQRLNAYMLKSLDFAI
SRFESCDITGIIDLDMLLHVNRMTHKLLTKYVKLDAFESLLSEANHSVSAPYGRITLHIF
SELMYDFLPRYCFNSSTQRFIKMPEKAPNFSSTDYAQHQRDRPALGANVPYYSYGSKPLN
YAFNSIQKLYNGFVGAPHFRVLCRVLGYSGIAVVIEELLKNIQGKMQTSIASYVMTIRQS
MDAKDGRPLSTACSSEQTFSALRNKLAKIIQNSDVKTRIFQDFREVGNSLLFCLYMEQAL
SQEEVLDLLQAAPFQKVFPQIFVKDVEKPEVKMKRLEYKYASLHVASNVEKYGTPRQAFI
ARDADLLTKERLCCGLSIFETILQRVREYLEKDKSLWIGDEKPKNNIMHVDECVEFYRIW
SALQFVYCIPVGEGEFTVEQLFGEGLNWAGCTFITLLGQARRFDVLDFSYHLLKVQRFDG
FNEAVEGIPIKKMVDRIRRFQVLNSQIFSMLNKYLTSASLDNNQVEQVKCFNPPSFPKQM
KNLSSSQEPPIYMRTGILLQQKHQD
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagcacaggacgtcgcccaggagcgcgtcacactcagcgatgccatcagcaat
gtcgatgttctcgatgagctcgagttgccagattctcagccttgtattgccggtgaaaac
tggtcaattgtgtaccatgtcaactttgatactaactttgaagaccgcaatgcgtttgtt
tgcggtgtggccaagtacattgaggaggctacggttcagtgccacctcaatgtcatgctt
gatgaaggcgagaagcacgctgtaatgctctacacatggcgatgctgttctcgggcaatt
ccacagccaaagtccaatgaacaacctaaccgccgcgacctgtacgagaagatcgtcgaa
gtcctcggtcctgaaaaagcggccattgagcgattctgctttgaagttaagcgactatgc
cacgactcgaagaaaaaggctggcactacgttcgtttctgaagcgtacttgctgacactg
ggaaaatttattaacatgttcgccgttctggatgagctcaaaaacatgaagagctccgtc
aagaacgactacgcgacatatcgaagggctgcacagtttttaaaagtcctttctgattct
gagtctctccaagaatcacaatcgctgtcaatgtttttagcgctgcaaaacaaaatccgc
gacaacctcaaggaatcactagagtcaattagcggctatgaggagctcttctgtgacctg
gtgaatctctttacgaacatgtacgagtgcaagcagtttgtactgccatcggaaaagcat
atgctggtcaaggtgattggcttcacgctttacctgatggacggcgagaactgcaacatc
aacaaactggatgccaaacgacgcataagccttgcgcggattgatcgcatctttaaggcg
ctggaaatggtgccactctacggcgacatgcagattgcgccctttcagacttacattaag
cgatgcgcccacttcgatgcgaacaagtggccaacgtgttcaaaccagacaaccaactcc
taccagagcgacattctgcagtacctgcccagcatcagagacgattacgtggtgttcatt
gccgagctgagtcgccactcgaacgaggtgacgaccacggttaaggacgccccgaggagt
gatgctgaaaatcgagagctgctaaagttggcgctgaagggaattcagttgttggctgat
tggactgctcacgtcactgaactgtacagttggaagttgatgcatcccactgacccacat
cagaataacctctgtcctgctgaggcggaggagtatgaacgagcaacgagatacaactac
tcctcagacgaaaagtacgctctaatcgagctggtcgctatggtgaaaggtctgcaggtg
ttgatgaaccgaatggaggcagtctttgtcgatgccatccggcgggccatctacgccgat
ttgcaggactttgtgcagatcactttgaaggagccactgagaaaggcggtgaagaacaag
aaggacgtcgtgcggacgatgatcagctcagtccgcgacacctgtgccgactacatgagg
ggctttgatgagcatcgagtagttgccggtggaagagggggaaacatggaggtggaggtg
aaagttccccgaaggaatgtcggcccgagcactacccagctctacatgattcgcacacag
ctggaatcgctgattagcgacaaggcgctcagtggaaggaggacgcttcgaaaggacatt
gacggacagtacctcatcgccattgaccagttccacaagcatagcttcttttggagttat
cttctaaactttagccaaactcttcgcgagtgctgtgacctcagtcagctgtggtatcgt
gaattctacctcgagatgacgatgggcaagagaatacagtttcccattgaaatgagcttg
ccgtggattctcatcgatcagatactcacggacaaggacgctagcatgatggagtgcatc
ctgtacccattggatctgtacaatgactctgcccactacgcactgaccaagtttaaaaaa
cagtttctctacgatgaagtagaggccgaagtgaacctgtgctttgatcagtttgtctac
aagctctcggagcagatttttagctactacaagcagatggccgccagtattacccttgac
aagcgatttagaactgatttggccacgctgggcgtcaactttccctggccaagctcgaat
cgctatgaaacgctgctgaagcaaagacatctacagttgttgggccgaatgattgacttg
gagcgacttattgcccagcgtttgaatgcctacatgctgaagagtctggactttgcaatc
agtcgattcgagtcgtgcgatataacgggaatcattgatttggacatgctgctccatgtt
aaccgaatgacgcacaagttgctgacaaagtacgtcaaactggacgcttttgagtcgttg
ctgagtgaagcgaaccactcggtctctgccccctacggccgcatcacattgcacattttc
tccgagttgatgtacgactttctgccacggtactgcttcaacagctccactcagcgattc
atcaaaatgcccgagaaggcgccaaactttagctcgaccgactatgcacagcaccagcga
gaccggccggcgctgggcgccaatgtgccctactactcctatggctctaaaccgctaaac
tacgccttcaactctatacaaaagctgtacaatggattcgttggggcgcctcactttcga
gtgctgtgtcgggtgctcggatactcgggcattgccgtggtgattgaagagctgctgaag
aatattcaggggaagatgcagaccagtattgccagctatgtgatgaccatcagacagtcg
atggacgccaaggacgggcggccactcagcacggcttgtagttcagagcagaccttctcg
gcgttgcgtaacaagttggctaagattatacaaaactccgatgtaaagacgagaattttt
caagattttagagaagtgggaaattcattgctcttctgcctgtatatggagcaggcactg
tcccaagaagaggtactggaccttcttcaagcagccccctttcagaaggtttttccgcaa
attttcgttaaagatgtcgaaaagccggaggtgaaaatgaagcgtttggaatacaagtat
gcgtcgctgcacgtggccagtaatgtggaaaagtatggcacgccaagacaagcattcatt
gcccgtgacgcagatctgctcaccaaagaacgactttgctgtggtttgtccatctttgag
acgatcctccagcgcgtccgtgagtacctcgaaaaagacaagtcactgtggatcggagat
gagaaaccaaagaacaacattatgcacgtcgacgaatgcgtcgagttctaccgaatctgg
tctgcactgcagtttgtctactgcattcccgtcggcgaaggcgagtttaccgttgagcag
ctctttggtgaagggctcaactgggccggctgcacatttatcaccttgctcggacaggcg
aggcgctttgacgtgcttgactttagctatcacctgctgaaggtgcagcgatttgacggc
ttcaacgaggcggttgagggaattccaatcaagaagatggtcgatcgaatccgtcgcttc
caggtgctcaactcgcaaattttttcaatgctcaacaaatacctcacttcagcctcactg
gataacaatcaggttgaacaggtgaagtgcttcaacccaccttccttcccaaagcaaatg
aaaaacttgtcctcctctcaggagccgccgatttacatgaggactggcattttgcttcag
cagaagcaccaagactaa
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