Rhagoletis zephyria (snowberry fruit fly): 108375490
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Entry
108375490 CDS
T08513
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
rze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108375490
03015 mRNA surveillance pathway
108375490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108375490
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108375490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_7
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
108375490
NCBI-ProteinID:
XP_017487111
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MAHERSPSAEAEKDGKDGKESSTKDVKPKVSSSSNSNRGRERDRRRRGSASSSSDSSGSS
SDSSSSRSSSGSGSRSSSSSSSGSSSSSSSSSSDSERGVNNRRRGGGGNSNAARKSGSRS
PRRSKSPRATSKIRKDKSRSKDRERDRERNERDRDRDRERNERDRRRSRTRSRSKDRDRA
RRTSNDRGGAGGGGGGGGDGAAAKRERSKERDRRSRSRSGSRSPRRRVRSSGERSPPAKR
RDRTRSRSATPKPTRIHVGRLTRNVTKEHVIEIFSCFGEVKNVEFPTDRYHPSFGRGMAY
VEYATPEECETAMKQMDGGQIDGQEVTVSPVQALKIRPPVRRPSLTMRRPAGRWRSPPMF
NRFNNRGRRSPPRGRRSPRRRSRSPIRRRRRSNSSDSSR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgagcgttcgccatctgccgaggcggaaaaagatgggaaggatggcaaagaa
tcgtcgacgaaagatgtgaagccaaaagttagctcctcgtcgaattcgaatcgtggtcgg
gagcgtgaccgcagaagacgcggttcagcgtcatccagcagcgatagtagtggcagttcg
tcagacagcagctcttctcgaagtagctcgggatcgggatcacgctctagctcttctagt
tccagtggttcatcctcttcttcttcgtcatcatcaagtgattctgaacgcggcgttaac
aaccgacgtcgtggtggtgggggaaactcaaatgcagctcgtaagagtggttcgcgctct
ccgcgtcgctctaaatcgccccgtgccacgagcaagattcgcaaggacaagtctcgttcc
aaggatcgggaacgcgaccgtgaacgcaatgagcgcgatcgtgatagagacagagagcga
aatgaacgcgatcgacggcgatcgcggacacgctcgcgttccaaagatcgggatcgtgca
cgacgtacatcaaacgatagaggtggtgcaggtggaggtggcggtggtggaggagatggc
gcagctgccaagcgcgaacgttcaaaagaacgcgatcgccgttcccgctcacgctcgggg
tcacgatctccacgtcgccgtgttcgcagctccggtgaacgcagtccgccggccaagcga
cgagatcggacccgctcgcgatcggccactccaaagccgacgcgtattcatgttggtcga
ttaacccgcaacgtaaccaaggaacatgtcatcgaaattttcagttgctttggtgaggtt
aaaaatgttgaattcccgacggaccgctatcatccttctttcggacgtggcatggcatat
gtggagtatgctacgccggaagaatgtgagacggctatgaaacagatggatggcgggcaa
attgacggtcaagaggttactgtatcgccggtacaagcactaaaaattcgtcctcctgtt
aggcgcccttcactcacaatgcgacgtccagctggtcgctggcgctcaccgccgatgttt
aaccgatttaataatcgcggaaggcgttcgcctccccgcggcaggcgttcgcctcggcgc
cgatcacgatcacctattcgtcgacgccggcgcagtaatagctcagacagctcacgttaa
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