Rhagoletis zephyria (snowberry fruit fly): 108375645
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Entry
108375645 CDS
T08513
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108375645
09123 Folding, sorting and degradation
03018 RNA degradation
108375645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108375645
03041 Spliceosome [BR:
rze03041
]
108375645
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108375645
mRNA degradation factors
5'-3' decay
Lsm complex
108375645
Spliceosome [BR:
rze03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108375645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
DAHP_snth_FXD
Motif
Other DBs
NCBI-GeneID:
108375645
NCBI-ProteinID:
XP_017487276
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MASGLEAYINHTVSIITADGRNFIGTLKGFDQTINVILDESHERVFSTTSGIEQIVLGLH
IIRGDNIAVIGLIDDQIDSRLDLANIRGEPLGPVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcttagaagcctatattaatcatacagtgtctataataactgcggatgga
cgcaattttatcggaacgctaaaaggattcgatcaaacaataaatgtgattctcgacgag
tctcacgagcgtgtgttttcgacaacttcaggtatcgaacagatagttttggggctgcat
attattcgcggagataatattgcagtgattggactaatcgatgatcaaattgattcacgt
cttgacctggccaatatacggggggaaccgcttggtccagttgtacattag
DBGET
integrated database retrieval system
