Rhagoletis zephyria (snowberry fruit fly): 108375931
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Entry
108375931 CDS
T08513
Name
(RefSeq) recombination repair protein 1 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108375931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rze03400
]
108375931
Enzymes [BR:
rze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
108375931
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
108375931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF4902
Motif
Other DBs
NCBI-GeneID:
108375931
NCBI-ProteinID:
XP_017487582
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MAKFAKPAGGQKSLENANEEAVVSSSSGFLSGEEDAVVSLKGKGRGRKAKREVVKEVEVL
PATEKSVKVAKAGGTGRGRKKVVAAEEKEQATTSNSVEEAVIEKKSAAPKRRGRKAAESA
TVDSQPVAAENWDAESGVAKAPAKRGRKAAATKVEPAASESNGVDSAPPATVNKGRGRGK
KVAATAATAIKETTAIQSLTEEPTTLRKQNKSTEEIAVAEDQQNGEVPKEAVKDTKKKRT
KGSKVKVEQTDASDGTGPGLDEKKPRSRGRAVKEEHEQDQPSEILEKSLEKPVKKAASKR
KGNKKESEIENLAQANELELDVKAEEEVKPSPKKKSKKEPKENKTKATKIRARADKTPEK
EAGEQLENNIKEISKKPQGRKRGATKTAISDGIEEVDGSKPAKAKKTEGALINSTVTKYN
SEDFKLPQGEEGAERFNLKISSWNVAGLRSWLKKDGLAFLDYELPDIFCLQEIKCTTDQL
PEEVARIPGYHPYWLCMPGGYAGVAIYSKIMPINVEYGIGNTEFDAVGRIITAEYEKFFL
INVYVPNSGRKLVNLEARMRWEKLFQEYIKRLDIIKPVVICGDMNVSHQAIDLANPKTNT
RNAGFTQEERDKMTELLALGFVDTFRHLYPDRTAAYTYWTYMANARSRNVGWRLDYFIVS
ERFTKRVVENCMRSQVMGSDHCPITLFLKM
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttgcaaagccggcgggagggcaaaaatctttggaaaatgctaacgaagaa
gcggttgtctcgtcgtctagtggtttcttgagtggcgaggaagatgctgttgtttctctc
aaaggaaaaggacgtggtcgtaaggccaaaagggaagtggtcaaagaagtggaggtcttg
ccggcaacggaaaaatcagtcaaggtggcaaaagctggtggtacgggccgagggcgaaaa
aaagtcgtagctgcagaagagaaagaacaagctacaacttcaaattccgtagaagaagct
gtaatagagaaaaaatcggcagcacccaaacgtcgcggaaggaaagcggctgaatccgct
acggttgatagccaaccggtggcagcggagaattgggatgcggaaagtggggtagcaaaa
gcaccagcaaagcgtgggcgcaaagcagcagctacgaaggttgaaccagccgcaagtgaa
agtaatggtgttgatagtgctccgccggcgacggttaacaagggacgaggccggggtaaa
aaagttgcagctacagccgccacagctattaaagagactactgcaatacaatcgcttacg
gaggagcctaccactctgcgaaagcaaaataaatctacggaagaaattgcagtagctgag
gatcaacaaaacggcgaagttccaaaagaggccgtaaaagacacaaaaaagaaaagaact
aagggatcgaaggtgaaagtagaacaaactgacgcaagtgatggtacagggccaggtttg
gacgaaaagaaaccaaggtctaggggtagagctgtaaaagaagaacatgagcaggatcaa
cctagcgagatactagaaaaatctttggaaaagccggttaaaaaagctgcaagtaagcgc
aaaggcaataaaaaagagtcagaaatagaaaacttagctcaggctaatgaacttgaattg
gatgtaaaagctgaggaagaagtaaaaccaagtcccaaaaaaaagtctaaaaaggaacct
aaagaaaataaaacaaaggcaaccaaaattagggcaagagcagataaaacacccgaaaag
gaggccggggaacaattggagaataatataaaagaaataagcaagaaaccacaggggcgc
aagcgaggtgccacaaaaactgctatttccgatggtattgaagaggtcgatggatccaaa
ccggcaaaagcaaagaaaaccgaaggcgctctcatcaattccaccgtcacaaaatataat
tccgaagactttaaactaccccaaggtgaagagggcgcagagcgatttaatttaaaaatc
tcaagctggaatgttgcgggcttgcgttcttggttgaagaaagacggcttagctttcttg
gattacgaattaccagatattttttgcttacaggaaatcaaatgcactaccgatcaactg
ccggaggaagttgcacgcatacctggttatcacccctattggctctgcatgcccggtggc
tatgcaggtgttgctatatactcgaagataatgccgattaacgttgaatatggcattgga
aacacagagtttgatgcagttggccgcataattacagctgaatatgagaagttcttctta
attaatgtatatgtaccgaattcgggacgaaagttagttaatttggaggcacgcatgcgc
tgggaaaaactattccaagagtatattaaacgtttggatatcataaagccagtcgtcata
tgtggcgatatgaacgtgtcacatcaggcaattgacctggcaaaccctaaaactaatact
cgtaatgccgggttcacgcaggaggaacgggacaaaatgactgaattgttagctctcggc
ttcgtcgatacatttaggcacttatatccagatcgcacagctgcttacacatattggact
tacatggcaaacgcacggtcacgcaacgttggatggcgtttggattactttatcgtgtct
gaacgtttcactaaacgagtagttgagaactgtatgcgctcacaggtaatgggcagtgac
cattgcccaattacattatttttgaaaatgtag
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