KEGG   Rhagoletis zephyria (snowberry fruit fly): 108376143
Entry
108376143         CDS       T08513                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108376143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rze03041]
    108376143
   04121 Ubiquitin system [BR:rze04121]
    108376143
Spliceosome [BR:rze03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    108376143
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    108376143
Ubiquitin system [BR:rze04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108376143
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 108376143
NCBI-ProteinID: XP_017487815
LinkDB
Position
Unknown
AA seq 659 aa
MLQDKQKEVKGSSGHRAATSSAAAYTSKDLKGLAIGHKVDSIKEGHQVILTLRDKGVLDE
DEDVLENVNLLDNEKAAKNIENKKNKVNYRPYDDEEFDEFGSLKQSSLLSKYDEEIEGPK
KDIFRIGETLSNAEIVRQRLEENEALGKVSLALPELKIASEYYTADEMLKFKKPKRKGTL
RKRNLKEPKEEPLVPVISATSNSSSRRSTSDHASRSRRTTGREHKHSSNEADEAKKVHVK
LAELESGLEEEVEDELDLDLIAPDEELIGVRIEEDEAEKELSMALNKTRKLKLLQKKEDD
FDIARIVQETGGTVKVEDEDEEELSAASALDGGSTLVLNTTAEFCRNLGDLPKDLYSREL
AQSSKMKIDESDDEDAPHHRHQDGDFDGSRHRRTSERMDLDEADGLKGDLWDGEGEDDEN
LDEDGEKVPVRNNWNEVDIKMEEDDDEDDDNDGGGVGSSYSRRKATKSPDDEEPLESKPI
LEEEPDVSVGVAGALKLAMNKGYLDKDTKKPMGTNRSTSLISAQSYAIEEKFYDDDRMGR
RDRYMGQMSEFKEKEGYRPGFKLDYVDEKGRMMNQKEAFRYLSHKFHGKGPGKNKIDKRM
KKMEQESKLRQMSSIDTPLNTLKLLQDKQKEVKAPYVVLSGQRATTSTAAAMTQISKKK
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgctgcaagataagcaaaaggaggtaaaggggtccagtggacatcgggcggcgaccagc
agtgcggccgcttacaccagcaaggacctaaaaggactcgctatcggacacaaggtggac
tccatcaaggagggccaccaggtgatccttacactgcgtgacaaaggtgtgctggacgaa
gacgaggacgttctggagaatgtcaacctgcttgacaatgaaaaggcggcaaagaatatt
gaaaacaagaaaaacaaggtcaactaccggccgtacgatgacgaggagtttgatgagttt
ggatcactgaagcagtcctctctgctgagcaagtatgacgaagagattgaaggtccaaag
aaggacatctttcggatcggagagacgctctcaaatgcggagattgttcgccagaggtta
gaggagaatgaagccctgggaaaggtctctttagcgctgccggagcttaaaatcgccagc
gaatactacactgccgatgagatgctgaagttcaaaaagcccaaacgaaagggcactctg
cggaagcgaaacttgaaagagcctaaagaggagcctttggtgccggtgatttcagcgacc
agcaacagcagttcccgacggtctacatctgaccacgcatcacggtcgaggcggaccact
ggtcgagagcacaaacattcatcaaacgaagctgatgaggctaagaaggttcacgtcaaa
ctggctgaacttgagagcggtctggaggaggaggtggaggatgagctagaccttgatctc
atagcacctgatgaagagctgatcggcgtccgcatcgaggaggacgaggcggagaaggag
ctctcgatggcgcttaataaaacgcgaaagctgaagcttttgcagaaaaaggaagacgac
tttgacattgcgcggatcgttcaggagacgggcggcacggtgaaggtggaggacgaggat
gaggaggaactgtcggctgccagcgccctggacggcggcagcactctggtgctcaacact
actgccgagttttgtcgcaacctgggcgatctgccgaaggacctctactcccgtgagttg
gcgcagtcctcgaagatgaagatcgacgagagtgacgacgaggacgccccccaccaccgc
caccaagatggcgactttgatggcagtagacataggagaacttcggagcggatggacctg
gatgaagccgacggcctcaagggtgacctttgggatggggaaggtgaagatgacgagaac
ctagacgaggacggcgagaaggtcccagttcgcaacaactggaacgaggtggacattaag
atggaggaggacgatgacgaagacgatgacaatgatggaggaggagttggatcaagctac
tctcgtcgaaaagccaccaaatctccggacgatgaggagccactggagagcaagcccatt
ctcgaggaggagcccgatgtcagcgtgggcgtggcgggtgcgctaaagctagcgatgaac
aagggctacctggacaaggacacaaagaagccgatggggacgaatcgatcgacgagtctc
atctcggcgcagtcctacgcaatcgaggaaaagttctatgacgatgaccgcatgggtcgc
cgtgaccgctacatgggccagatgtcggagttcaaggagaaggagggctaccggcctggc
ttcaagctcgactacgtcgatgaaaagggccgcatgatgaaccagaaggaggctttccgc
tacctttcgcacaagttccacggcaagggccccggcaagaataagattgacaagcgcatg
aagaagatggagcaggagagtaaacttcgccagatgagctccattgacacgccgctgaat
acgctgaagttgctgcaggataagcaaaaggaggtaaaggcgccctatgtggtgctcagt
ggacagcgggcgacgaccagcacggcggcggcaatgacgcaaatctccaagaaaaagtga

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