Rhagoletis zephyria (snowberry fruit fly): 108376219
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Entry
108376219 CDS
T08513
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
rze03015
mRNA surveillance pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108376219
09122 Translation
03013 Nucleocytoplasmic transport
108376219
03015 mRNA surveillance pathway
108376219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108376219
03041 Spliceosome [BR:
rze03041
]
108376219
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108376219
Spliceosome [BR:
rze03041
]
Complex C
Other components
EJC/TREX
108376219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
108376219
NCBI-ProteinID:
XP_017487932
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MMRRRSERKKSTDVSSPAPASRRTIRRSRKTSETASEKSAHPEMSPTGDEAEKDTPSADC
PVEPTNEESSAEPGRNRSRNRTPVKDRSSPAKRKAQNTIADLKIEAIPEENSSIKEDSPN
ESKPGADVTASNEQAPKSDIDAQAASCSSSPKTNVDIMKPLDVLEIQAEEQDEEKLQSQD
ASTKNENMVENVDSSNKNEEEKSNNDEIINKGFEAGSSDATDDLKNNKTDSQSPKCEVTN
SDEKTDAAKANKRTWITKRTVQNRSPLLVITTETLKRPEGVHPAPKLNLGSPEIQEVNSE
REEGEQTPSPERETHKINTINSTEKLNRNPIELSSAPKTINKINIKVEKQSPTSKKPSNV
LFITNLVRPFTVLQLKGLLARTGKMVEEGFWIDRIKSKCYVQYETEDEAVETRHALHGVR
WPVSNPKCLIVEFARKSDLDRAIQSTKEEQSNFGQESHRDNVLIGMGWNRDRNGIDEKRT
KKNFGLLAQCNIFQTIRPVREWDVGKKESLDRDKNREILRRRSREREIFFGNRETDRNGK
DRRPRSKGRGEARSSSRSPVRKVKKKENDPPLRLLDDLFRKTKSTPCIYWLPLTPEQIAE
KEAFRQKRLEEHKLRVKQRELEKGKEREKERNRTNERRDRERERDQRRNRSSDRRSRSRD
RRRY
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggcgacgaagcgaaagaaagaaatctactgatgtttcgtctcctgccccggcg
tcgcgtcgtacgattcgtcggtctcgcaaaacatctgaaactgcaagtgaaaagagcgca
catcccgaaatgtcaccaacgggggatgaagcagaaaaggatactccctctgcggattgc
cccgttgaacccacaaatgaggaatcgtcagctgaacccggtagaaatcgttcacgtaat
cgtacaccggtaaaggatcgaagcagtcccgccaaacgcaaagctcagaacactatcgct
gacctaaaaatcgaagctatcccggaagaaaacagctcgataaaagaagatagcccaaat
gaaagcaaaccaggtgcagatgtgactgcaagcaatgaacaagctccaaaatcggatata
gatgcacaagctgcttcgtgctcgtcaagtccgaaaactaatgttgatattatgaagcca
ttagatgtattggaaatacaagcagaggaacaagatgaagaaaagttacaatcacaagat
gcatcaactaaaaatgaaaatatggttgaaaacgttgatagttcaaataaaaatgaagaa
gaaaagtcgaataacgatgaaataataaacaaaggatttgaagcgggtagctctgacgct
acagatgatttgaaaaataataagacagattctcagtcacctaaatgtgaagtcaccaat
tccgacgaaaaaacagatgcggcaaaggcgaataagcgaacctggattacaaagagaaca
gttcaaaatcggagtccactgcttgtgattaccactgaaacattaaaacgtcctgaaggc
gtacatcctgctccaaaactgaacttagggtcccctgaaatacaagaagtaaactctgaa
cgcgaagaaggcgaacagacaccttctccagaaagagaaacacacaaaataaatactata
aatagtactgaaaaacttaaccgcaatccaatagagctatcttccgcaccaaaaactatt
aacaaaataaatataaaagttgaaaaacagagcccgacaagtaaaaagcctagtaatgta
ctattcattacaaatcttgtccgaccatttaccgtgctccagttaaaaggcttgttagct
cgcacgggaaaaatggtggaagagggattttggattgatcgcataaaatcaaaatgttac
gtacaatatgaaactgaagatgaagccgttgaaacccgtcacgcattacatggagtacga
tggccagtctctaacccaaaatgcttaattgtagaatttgcaaggaagagtgacttggat
cgtgctattcaatctactaaagaagaacaatccaattttggtcaagaaagtcatagagat
aatgttcttatcgggatgggttggaatagggatcgaaatggcatagatgaaaagaggaca
aaaaagaattttgggttattggctcaatgtaatatatttcagacaataagaccggttcga
gaatgggatgttggtaagaaggaaagtttagatcgagataaaaatagggaaatcctaagg
cggcgtagcagagagagggaaattttcttcggcaatcgggaaactgatcggaatggaaag
gataggagaccacgttcaaagggaagaggagaagcgagaagtagtagccgatcacctgta
cggaaggtaaagaaaaaggaaaatgacccaccgttacgacttcttgatgatttgtttcgc
aaaactaagagtacaccatgtatttactggctacctttaacacccgaacaaattgctgaa
aaagaagcattccgacagaaacgacttgaagaacataaactgcgcgttaaacagagggag
ttggagaaagggaaggaaagggaaaaagaaaggaatcggaccaacgaacgaagggataga
gaaagggaaagggatcaaagacgtaatcgatccagtgatcgccgttctcgtagtcgtgat
cgacgccgttactaa
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