Rhagoletis zephyria (snowberry fruit fly): 108376552
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Entry
108376552 CDS
T08513
Name
(RefSeq) FACT complex subunit Ssrp1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108376552
03036 Chromosome and associated proteins [BR:
rze03036
]
108376552
Transcription factors [BR:
rze03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
108376552
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
108376552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108376552
NCBI-ProteinID:
XP_017488256
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MDFLEYPKALKEDRGGLTSGRLKLAETQIIFKNHKTGKIDTLNSNDFKKISWQRLGDSFG
IRIMMKSGQVFRYGGFKESEKEKVEKFINSSYSTSLETQDASIRGWNWGTTSFEGSVLNF
DVKKNERAFEIPLTNVSNTTTAKNEVTLEFHQNDDTSVSLMEMRFHIPTIDGIDPVQAFM
EQVLQKANIIRETGECIAIFKELQCLTPRGRYDIKLFPTFIQLHGKTFDYKIPISSVLRL
FQLPHKDTRSVYFVMSLDPPIKQGQTRYHFLILLFNRDEETTVELALSESEIKEKYEGKL
SKSMSGPLYDTVTRLMRVLIQRKITTPDPTFVNSARDIPAVSCSYRASNGMMYPLERGFI
YLHKPPVHIRFDEIQSINFARSGGSTRSFDFEIETKAGVVHTFSSIEKEEYSKLYDFVST
KGLRVKNVGTEGDKKKKSFKDDDLVDSDMDDDEPDAYLQRVREEGRVREELGDSDESDDD
FNPGAEEEDVAEEFDSEVDDSSDSSGGGSDSEGEKKHKKKHKEKKVKKAKSSEKKKKKSS
KDDDGKPKKPSTAYFIWMKEARDQIKKDNPGLGVTDIAKKAGELWKEVKDKAKYEELAAK
ERKNYEKLLSEWKANGGGASTSKASSSSSSSKSKAKKSSDSKKSSGSPTKSQSGFKSKEY
IESDDSSSSSSSDEGDSQKKKKSKEKPKEKPKATKRKRSDSSDNDSDSSKGKGKGSESEE
ILSSPTASSASDSD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggactttctcgagtacccaaaagcacttaaggaggatcgtggcggtctgacttctggt
cgactaaagctggccgaaacgcagatcatctttaagaaccacaaaactggaaagattgat
acgctcaattcaaatgattttaaaaagatcagctggcaacgattaggcgacagcttcgga
atccgcataatgatgaagagcggccaagtcttccgttacggcggatttaaagaaagtgag
aaggagaaagtcgaaaagtttatcaacagcagctactcaacttcccttgaaacacaggat
gcctcgatcagaggctggaactggggcactacctcgtttgagggatcagtgctaaacttt
gatgtgaagaagaacgaaagagcctttgagataccactcactaacgttagcaacactacg
actgctaagaatgaagtcactctcgagtttcaccaaaatgacgacacttcagtctcgttg
atggagatgcgtttccatattcccaccatcgacggaatcgatccagtgcaggcttttatg
gaacaagtcctccaaaaggcgaatatcattcgagagaccggcgaatgcattgctatcttc
aaggagttgcagtgtctcactcctcgtggtcgctatgacatcaaactctttcccaccttc
attcaattgcacggcaaaacttttgactacaaaattcccatctcatcggtgttgagactt
ttccagctacctcacaaggacacccgctctgtgtacttcgtaatgagccttgacccgccg
atcaaacaaggccagacgcggtatcactttctcattctacttttcaaccgagatgaggaa
accaccgtcgagctcgccctttcagaaagcgaaattaaagaaaagtacgaaggaaagctg
agcaaatcaatgtctggaccgttgtacgacactgtcaccaggctaatgcgagtgctgatc
cagcgaaagatcaccacgcctgaccctacattcgtcaactctgctcgagatatcccagcg
gtcagctgctcgtaccgagcctcaaacggcatgatgtacccactggagcgtggtttcatt
tacctacacaaaccgcctgttcacattcgatttgacgaaattcagtcgatcaactttgct
cgatctggtggctccacgcgttctttcgattttgaaattgaaaccaaagccggtgtggtg
cacaccttcagttccattgaaaaggaggagtactcaaagctctacgactttgtctccact
aaaggcctgcgcgtgaagaacgtcggcactgagggcgacaagaagaagaagagtttcaag
gatgatgacctagttgactcggacatggacgacgatgagcctgatgcctatctgcagcga
gtccgagaggagggccgtgttcgcgaagagctgggcgactcggacgagagtgacgatgat
ttcaatccgggcgccgaagaggaagacgtggcagaggagtttgactctgaagtggatgat
tcatcggactcgtctggcggcggcagcgactctgagggcgagaagaagcacaagaagaaa
cacaaggagaaaaaggtcaaaaaggccaagagtagtgaaaagaaaaagaaaaagagcagc
aaagacgacgacggaaagccaaagaagccctcaacggcctacttcatttggatgaaggaa
gcccgtgaccagatcaaaaaggacaatccaggtttgggggtgacggacattgccaagaag
gccggagagctgtggaaggaagtcaaagataaggccaagtacgaggagttggcggcaaag
gagcggaagaactacgaaaagttgctttccgagtggaaggccaacggcggcggtgcgtct
acctcaaaggcatcttcctcttcctcctcgtcaaagtcgaaagccaagaagtcgtcagac
tcgaaaaaatcgtccggctcgcccaccaaaagtcagagtggctttaagagcaaggagtac
attgagtcggatgatagttcctcgagttcctcttctgatgagggtgattcgcaaaagaaa
aagaaatcgaaggaaaagcccaaagagaagcctaaagccacaaagagaaagcgcagcgac
agcagcgacaatgacagtgactcttccaagggcaaaggaaaaggctccgagtctgaggag
attctttcgtcgccgactgcatctagcgcatccgattctgactag
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