Rhagoletis zephyria (snowberry fruit fly): 108376791
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Entry
108376791 CDS
T08513
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2-like
KO
K14793
ribosomal RNA-processing protein 9
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rze03009
]
108376791
Ribosome biogenesis [BR:
rze03009
]
Eukaryotic type
90S particles
Other 90S particles
108376791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_SPT8
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_HPS5
RMC1_N
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
108376791
NCBI-ProteinID:
XP_017488522
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSSSFFLKKEPKANKKRKLSKDPRATGAKKRSDKKQPTSNAPPARKRPQKDDEEIASDDE
FGSGEGDATNLVFSSDEVEEETPQDKRLRLAKQYLEEIEKQEAERVEDRELHDHVAQRLQ
SEYLDSVGKLRRNIAGTIEDYDAENVVVLKHKKQHLPMCAFAVSPDGKYLFSGAKTQFVL
KWSVQGQVKLEGLFNVQPHNEDEKSDTQRRSHVTAICLSTDMKYLALAEGGRNIQIWCPK
DLTHLKTFKGHRDVVTSLVFRKDTHDLYSGSKDRSVKIWSLDEMAYVESLFGHQAPITGI
DALSRERAITSGGIDCSLRIWKITEESQLIYNAHQNGIECVKFINDENFVSGGEDGSLCL
WSALKKKPLCTEALAHGTQSNGVPNWITAVACVVNTDLLASGSFDGYIRLWQSLDNSRKL
KQILKIPVPGFINALAFNSNGTKLFAAVGQEHKLGRWWRIKEAKNKIIIIDFITTPIKAS
LI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcattctttcttaaaaaggaacctaaggcgaataaaaaacgaaagctttca
aaagatccacgagcaactggtgccaaaaaaagaagtgacaagaaacagccaacaagcaac
gcaccaccagcacgtaaacgaccgcagaaggacgatgaagaaatcgccagcgatgatgag
ttcggaagcggcgaaggagatgccaccaatttggttttctcatcagatgaggtggaagag
gagacaccacaagacaaacgattgcgtttagcgaaacaatacttagaagaaattgaaaaa
caagaagcggagcgtgtggaagatcgtgaattacatgaccacgtagcacagcgcctacag
tcagagtaccttgacagcgtggggaaattgcggcggaatatagccggcactattgaagat
tatgatgcagagaatgtggttgtgcttaaacataaaaagcaacatctaccaatgtgcgcg
tttgccgtctcacctgatggtaaatatctatttagtggcgctaaaacacaattcgtgcta
aaatggagcgtacaaggtcaagtaaagctggaagggttatttaacgtacaaccacacaac
gaagatgagaaaagcgatacgcagcgtcggtcacacgttacggcaatatgtttatcgact
gacatgaaatacttagctctggccgaaggtggtcgaaacatacagatttggtgccccaag
gatctaacacacttaaaaacgttcaagggacacagagatgtggttacctcgctcgtcttc
cgaaaggatacacatgacttgtattcgggctcaaaggatagatcagtgaaaatttggtcg
ctcgacgaaatggcctatgtggagagcctatttggtcatcaggcgcccattacaggcata
gatgcgctgagtcgtgaacgtgcaattacctcaggaggtatcgattgctcattacgtata
tggaaaattactgaggaatcacaactgatctacaacgcgcaccaaaatggcattgagtgt
gttaaatttataaacgatgaaaatttcgtttccggaggcgaagatggttcactctgtcta
tggagcgcattaaaaaagaaaccgctctgtacagaagcgctggcgcacggtacccagagc
aatggagtgcccaactggataacggcagttgcttgtgtggtgaatacagacttattagca
tcaggttcctttgatggttacattcgtctgtggcagtcccttgacaattcacgcaaactt
aaacaaattttaaaaattcctgtgccaggtttcataaacgccttagcgtttaatagtaat
ggcacgaaattattcgcagccgttggtcaagagcacaaattaggccgttggtggcgaatc
aaggaggcgaaaaacaagattatcatcattgattttattacaactcctataaaggctagc
ttaatttga
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