Rhagoletis zephyria (snowberry fruit fly): 108377073
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Entry
108377073 CDS
T08513
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
WHD_SNRNP200
ResIII
CmlS_C
DEXQc_Suv3
HHH_5
Motif
Other DBs
NCBI-GeneID:
108377073
NCBI-ProteinID:
XP_017488829
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All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
VCAPTGSGKTVLLEMAIVRELMKIDCGLSAQTSFKDLHILYLAPLKAIVEEKCNDWHKKF
SSFGLKCFALTGDTEFDDYSSVQVFSYTNINIILTTPEKFDHVIRTDPRSRELLRVLKLI
LIDEVHILSDRQRGDVLEATITRIKALRSKHNSSSQLVLPPLRFIAISATVPNVSDVAAW
LDSSNGMGVTISQNLRPVKLEKIVLGYDPIPSARASEYRFEIQLSYKVEAIIRAHSDSKP
VIVFSSTRKSVEFTAKVLAASNETYFFSDNHRDEYFNEVSKLINANFDISSGFIYDNESY
FKNVDLKTCLASGVGFYHSGMDPAERRLLEKLFAKSLIPVLVSTSSLAMGVNLPAHMVII
KNTVQYLAGKTIEYDSAQVLQMIGRAGRSQFDVTAKAVIMTETSKKNFYDTLLNSDKAIE
SVLPLTLIEQLMIEIVLRTVTSIETTVEWICSTFMYIRIVSNPSYYGSSIAKGDIKGSLP
FIFNWSHENINKLANLSLINMKPESNSFEPTHLARIVTRYGISIKSTELLFKMLKEGFNL
KMLLEKLSECQELSSDIILRVSEKKFLNEYSKSLRFKSKDKIKNSSMKINCLLQATFESI
QIDSTLTQDSSNLVRRGQRITKCFVEICLYLFSLPKYSSLKEKFSCQEMHFETIASAVLL
SKSFRAQLWHDSKFVSKQLSEIGPVLSRTLVEKGYDSFEKIMDENPRNIEFCLHRNPPFG
SYLQEEIKSLPNYDLSLTKVDLSCDFKFLANQSIQSLSQVRLDLSIKQGSSSKPFLNPKK
HSCILVVGCQECNYLLSFERTNDEVLQSCGAILKNIIVVQTKFAYANDSSQSKSLAESPE
FEALFEMSSQMTKGNKKQKISIPMPAPKKTKIDPSNVAQIKREDTSEFLNFVNKMTAAQN
EEFVNHSKTNQFIFHYTYGNHQRHTIQAMFVSESFVGLDVEAKLALSFSTTVYPKSKRQL
NSVQQTLICKDNQLRFSSSKDEHQIGLASSSSSIVNPFSSTVSSINLTDHELVSTLNDTI
FITDEDESDNTNEVISVKSEINIASDISSAQVPSTPSEVSQVDNGSQYESASYIYSTQKS
QRDRRNYFPTRVLPSQEYTASPYFAKKANK
NT seq
3335 nt
NT seq
+upstream
nt +downstream
nt
ctgtttgcgctcccactggttctggcaaaacagttttgcttgaaatggcaattgttcggg
agctcatgaaaattgattgtggtttatctgcgcaaacctctttcaaagacctgcacattc
tctacttagctcctcttaaagcgattgttgaagaaaaatgcaatgattggcacaaaaagt
tttcctcgtttggattaaaatgtttcgctttaaccggtgacaccgagtttgacgactaca
gttctgtccaagttttctcttacactaacatcaacatcatactcactacacctgagaagt
ttgatcacgttattcgaactgatccccgaagtcgagagcttttgcgagttctcaagttaa
tcttgattgacgaagttcacatactttctgatcgacagcgaggagatgtccttgaagcga
ccattacgcgaatcaaggctctacgatctaaacacaattcttcatcacagttggtcttgc
cgccactgagattcatcgccatttctgccactgttcccaacgtaagtgacgttgctgctt
ggcttgacagctcaaacggaatgggcgtaacgatttcccaaaatttgcgacctgtcaaac
ttgaaaagatcgttttagggtatgaccctattccttcagctcgagcttcggagtaccgct
tcgaaattcagttgtcctacaaagtggaggccatcattcgtgctcactcggactccaagc
ctgttattgtgttctcttcaactcgaaaatctgttgagtttacagccaaagttttggcgg
cttcaaatgaaacctacttcttcagcgacaaccaccgtgatgagtacttcaacgaagttt
ctaagctcatcaatgctaattttgatatttcaagtggtttcatttacgacaacgagagct
actttaaaaacgttgatctgaaaacgtgcttggcttctggtgttggcttctaccactcgg
gcatggatcctgccgagcgtcgtttgctagaaaaactgtttgccaagtcgcttattccag
ttttagtttccacttcatcattggcaatgggagtcaatttgcccgctcacatggtcatca
tcaaaaataccgtgcagtacttggctggaaagacaattgaatacgactctgctcaagttt
tgcaaatgattggtcgtgctggacgctctcagtttgacgtcactgcaaaagcagtcataa
tgacggagacaagcaagaagaacttttacgacacgcttctgaactctgataaagcaattg
aaagtgtcttgccgttaaccttaattgagcaactaatgatagaaattgttctccgcactg
tgacaagcatcgagacgaccgtcgaatggatctgctctacattcatgtacattcgaattg
tttccaatccttcttactacggtagctcaattgccaaaggagacatcaaaggatcacttc
cattcattttcaactggtctcacgagaacatcaacaaattggctaatttgagtcttatca
atatgaagccggaaagtaactcttttgagcccactcacctcgctcgcatagttactcgct
atggaatttctatcaaatcaaccgagctgctcttcaaaatgctcaaagagggctttaatt
taaaaatgcttttggaaaaactgagtgagtgccaagagctgtcaagtgatatcatccttc
gtgtgtcagagaaaaagttccttaacgagtacagcaaaagtctgcgtttcaagtcaaaag
ataagataaaaaacagttcaatgaaaattaactgtcttcttcaggctacatttgagtcca
ttcaaattgatagcactttaactcaagattcgtctaatctggttcgccgtggccagcgaa
ttaccaagtgctttgttgaaatttgtctgtatttgtttagtttgcccaagtattcaagct
taaaagaaaagttttcctgtcaagagatgcactttgaaacgattgcatctgcagttttgt
tgtcaaagtcttttcgcgctcaactttggcacgattctaaatttgtttcaaaacaacttt
ccgaaattgggccagtgctaagtcgcactctagtggaaaaagggtacgattcattcgaga
aaattatggacgaaaatcctcgtaacattgagttttgccttcatcgaaatccaccatttg
gatcgtacttacaagaggagataaaatcgttgccaaattacgatttgagtttgaccaaag
ttgatctttcatgcgatttcaagtttttggccaatcaatcaattcaatctttgtctcaag
ttcgtcttgacttgtctatcaaacaaggaagctcttctaagccttttctcaatccgaaaa
aacattcttgcattttagttgttggctgccaagaatgcaattacctactttcatttgagc
gaactaatgatgaagttctacagtcgtgcggcgccattctgaaaaacatcatcgttgttc
agacaaagtttgcctatgccaatgattcatcacagtcaaaatcattggctgagtctccag
agtttgaggctctgtttgaaatgagctctcagatgactaaaggcaacaaaaagcagaaaa
tttccatccctatgccagctcctaaaaagaccaagattgacccgtcaaatgttgctcaaa
tcaagcgagaagacacttcagagttcttgaattttgtcaacaaaatgaccgctgctcaaa
atgaggagtttgttaatcactcgaaaaccaatcagtttatctttcactacacctacggca
accaccagcgtcacactattcaagccatgtttgtttctgagtcttttgttggccttgacg
ttgaggccaaactagctttgagcttcagcaccactgtttatcctaaatcaaagcgacagc
tcaactcagtgcagcagactctcatttgcaaagacaatcagcttcgattttcatcatcaa
aagatgagcatcaaattggcttagccagctcatcaagctcaattgtgaaccccttttcaa
gtaccgtcagttccatcaacctgacagatcacgagctcgtgtccactctgaatgacacaa
tttttattactgatgaggacgaaagcgacaacactaatgaagtgatatcggtgaaaagcg
aaatcaacattgctagtgacatttcttctgcccaagtgccgagtactccatcggaagtaa
gccaagttgacaatggcagtcagtatgaatcagctagctacatctactcaacacaaaaaa
gtcaacgagatcgtcgcaactactttcccactcgtgtgttgccctctcaggagtacactg
ccagtccgtattttgccaagaaagccaataagtag
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