KEGG   Rhagoletis zephyria (snowberry fruit fly): 108377240
Entry
108377240         CDS       T08513                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108377240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rze03041]
    108377240
Spliceosome [BR:rze03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108377240
 Complex B
    108377240
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_9
Other DBs
NCBI-GeneID: 108377240
NCBI-ProteinID: XP_017488992
LinkDB
Position
Unknown
AA seq 430 aa
MGSEDRDRRRHRSRSRDRERGERDRDFRRSRSRDRKREGPAGGRDRHTRSRRRKPSLYWD
VPPPGFEHITPMQYKAMQAAGQIPANAVPEIPQAAVPVVGSTITRQARRLYVGNIPFGVT
EEEMMEFFNQQMHLTGLAQAAGSPVLACQINLDKNFAFLEFRSTDETTQAMAFDGINFKG
QSLKIRRPHDYQPMPGVADSQPVSAPVANGVISTVVPDSPHKIFIGGLPNYLNEEQVKEL
LLSFGQLRAFNLVKDAATGLSKGYAFSEYVDHSITDQAIAGLNGMQLGDKKLIVQRASVG
AKNAQNSSTTAAPVMIQVPGMSMVGTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKE
ECNKYGVVRSVEIPRPIEGVDVPGCGKVFVEFNSVMDCQKAQQALTGRKFSDRVVVTSYF
DPDKYHRREF
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgggatccgaagaccgcgataggcgccgccataggtcacgttcaagagaccgcgaacgc
ggagaacgcgatcgcgatttccgtcgttcgcgttcacgagatcgcaaacgtgaaggtcca
gcaggtgggcgcgaccggcacacacgttctcgacgaaggaagccatcgttatactgggac
gtgccgccaccaggcttcgagcacattaccccgatgcagtacaaagccatgcaagctgct
ggtcagataccggcgaatgccgtaccagaaattccacaggctgctgtaccggttgttggc
tctactataacgcgacaagcccgtcgtctttacgttggaaatataccattcggtgtcaca
gaagaagaaatgatggagtttttcaatcagcaaatgcatttaactggtctagcacaagcg
gctggaagtcccgtgctggcgtgtcaaatcaatttggataagaatttcgctttcttagag
ttccgttcgacagatgaaaccacacaggccatggcattcgatggcatcaattttaaagga
caaagcttgaaaataagacgcccgcatgattaccaacccatgccaggtgtggctgattct
caacctgtatcggcgccagttgccaatggtgtgatttcaactgttgtgccagactcgccg
cacaaaatattcattggtggtttgccaaattacttgaatgaagaacaggttaaagagttg
ctactctcatttggacaattacgggctttcaatttggttaaggatgctgcaactggtttg
agtaaaggttacgcattctccgaatatgttgaccacagcataactgatcaggctattgct
ggtctaaacggcatgcagctgggcgacaagaaactgatagttcagcgcgccagtgtaggt
gctaagaatgcacaaaatagttccactaccgctgcgccggtcatgatacaagtgcctggc
atgtccatggtcggaacgtctggtccacccaccgaagttctttgcttattgaatatggtt
acgcccgatgagttgcgcgacgaagaagaatatgaagatattttggaagatataaaagag
gaatgtaataagtatggtgttgtgcgcagtgttgagataccccgacccatcgaaggcgtt
gatgtgcctggttgcggtaaagtattcgttgaattcaattcagttatggattgtcagaag
gcacaacaggcgctgactggacgtaaattcagtgatcgtgttgtggttacttcttacttt
gatccagacaaatatcatcgacgtgaattttaa

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