Rhagoletis zephyria (snowberry fruit fly): 108377279
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Entry
108377279 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: cactin-like
KO
K25058
cactin
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108377279
Spliceosome [BR:
rze03041
]
Complex C
Other components
Complex C specific factors
108377279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cactin_mid
CactinC_cactus
HTH_63
Motif
Other DBs
NCBI-GeneID:
108377279
NCBI-ProteinID:
XP_017489030
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MASSERHHRPHTSSSTTTSSSSDRHNNSHHHQERTEEERRRQKELIKALETPEQKRARRL
AKKEEKERKRQAMAGWDDEYSGYTNEDNPFGDSNLRETFIWGKKYEKLGLKSKLDEEQIR
AINRERAIRNRHELEKVKQRRLEREREREERAEEMSQMQRAKEAEQFKEWAKQEDYFHLK
QAKLRSKLRIREGRAKPIDILARYXQTGRLLSPEAGEAALEAAEPYNALNGLRIRDLEDL
EADIRVYLELDSGAEANADYWRNLQVIVEDELAKLKLANMDLAERRREGINPSVSAEISR
LLAGKTPAQLVKLQTQILAKIHSKEEGIDIGYWETMLARLKAQIARAHLRTFHEANLGRR
AQLIATFQQQLRQMDPRRSAATATQEKEMKVGGETEAADDEELKNDEVEEEAPAEEEEDE
LRFLSAAELEQKCLQDYRSGGTAAAPYSPRPLPVEELPTGALIISAEDRARELDEQRAAT
LKRLLAFPTPFVQFDRSEPGSSGKKGGNKRGKKGGDKAAEAAEESTANYDHNALAMTRDE
EAFLREARRGMADDEAVFSVEEQALLQAKDRYSWSEKYRPRKPRYFNRVHTGFEWNKYNQ
THYDVDNPPPKVVQGYKFNIFYPDLIDKSTTPSYKITACPENRDFAFIRFTAGPPYEDLC
FKIVNREWNYSYKAAFAVSSRTTFSSCGSTLSGTGTGDKKEVFRWYAYFLQYFYTLEAAN
KRTVYVLSAKLLFLQKKRSKLD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtctgaacggcaccaccgtccgcacacctcctcctccaccaccacctcatct
tcatcagatcgccacaacaactctcaccaccatcaagagcgaactgaagaggagcgtcgc
cggcagaaggagctgatcaaggcgctggagacgcccgagcagaagcgcgcccgccgactg
gcaaagaaggaggagaaggaacgaaagcggcaggcgatggccggctgggacgacgagtac
agcggctacaccaacgaggacaatcccttcggcgactcgaaccttcgagagaccttcatc
tggggaaagaagtacgagaagctgggcctgaaaagcaaactcgacgaggagcagattagg
gcgatcaaccgcgagcgggccattcgaaatcgccacgagctggagaaggtgaagcagcgt
cggctggagcgggaacgagaacgcgaagagcgcgccgaggagatgtcacagatgcaacgc
gccaaggaggcggaacagttcaaagagtgggccaaacaggaggactacttccacctgaag
caggcgaagctgcgctcgaagctacgcattcgggagggccgtgccaagcccattgacatt
ctcgcccgctacatncaaacaggaagactactttcacctgaagcaggcgaagctgcgctc
gaagctgccgagccctacaacgccctcaatgggctgcgcatccgcgacctggaggacctg
gaggcggacattcgcgtgtacctggagctggacagcggcgcagaggctaacgccgactac
tggcgcaacctgcaggtcatcgtcgaggacgagctggcgaagctgaagctggccaacatg
gacctggcggagcgccgcagagagggcatcaatccttcggtgtcggcggaaatcagccgc
ctgctggcgggcaagacgcctgcgcagctagtgaagctgcagacgcagatcctcgcgaag
attcactcaaaggaggagggcatcgacattggctactgggagacgatgctcgcacggctc
aaggcgcagattgcccgcgcccacctccgtacgtttcacgaggccaatttgggccggcga
gcgcagctgatcgccacctttcagcagcagctccggcagatggatccgaggagatctgcc
gcaactgcaacccaagaaaaggagatgaaggtcggcggggagacggaggctgcagatgat
gaagagctgaagaacgatgaggtggaagaggaggcaccggcggaggaggaagaggacgag
ctgcgtttcctctccgccgccgagctggagcagaagtgcctgcaggactaccgctccggc
gggaccgccgccgccccctacagcccgcgaccgctgcccgtggaggagctgcccaccgga
gcgctgatcatcagcgccgaggatcgcgcccgtgagctggacgagcagcgggcggccacg
ctcaagcgcctgctcgccttccccacgcccttcgtccagtttgaccgcagtgagccaggc
agcagcggcaagaagggcggcaacaaacggggaaagaagggcggcgataaggctgctgag
gcggctgaagagtctaccgccaactacgaccacaacgccctggccatgacccgggacgag
gaggccttcctgcgcgaggcccggcgcggcatggccgacgacgaggcggtcttcagcgtg
gaggagcaggccctcctccaggcgaaggaccgctacagctggtcggagaagtaccgcccg
cggaagccgcgctacttcaaccgcgtccacaccggcttcgagtggaacaagtacaaccag
acgcactacgacgtggacaaccccccgccgaaggtcgtccagggctacaagttcaacatc
ttctacccggacctgatcgacaagtcgacgacgcccagctacaagatcaccgcctgtccg
gagaatcgcgactttgccttcatccgcttcaccgccggcccgccctacgaggacctctgc
ttcaagatcgtcaatcgcgagtggaactactcctataaggcggctttcgcagtcagttcc
agaacaacattctccagctgtggttccactttaagcggtaccggtaccggcgataagaaa
gaggtctttcggtggtatgcatactttcttcaatatttctacacacttgaggctgccaat
aaacgcactgtttatgtactgtcggccaaacttttgtttctgcaaaagaaaagaagtaaa
ctcgattaa
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