Rhagoletis zephyria (snowberry fruit fly): 108377408
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Entry
108377408 CDS
T08513
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108377408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108377408
Membrane trafficking [BR:
rze04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108377408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Clathrin
ANAPC4_WD40
zf-RING_5
zf-RING_2
WD40_CDC20-Fz
Beta-prop_EML_2
zf-RING_16
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8
Beta-prop_WDR3_1st
DUF3837
zf-RING_UBOX
zf-C3HC4_2
Beta-prop_HPS5
zf-rbx1
zf-C3HC4
zf-RING_Vps41
Prok-RING_1
Vps39_1
Motif
Other DBs
NCBI-GeneID:
108377408
NCBI-ProteinID:
XP_017489159
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MNELKAPSLQSLLESDHGSSDSLLAESLLDVEDLDDVEYSIPPTNTLPTLESALSEFEAD
SDIGSELGVPVPAPTPTPSIAEEGGVRNGGAGGGGSIMRYAMLQGVSTQIASAADRVNAG
LATACAVSTLIAIGTSHGHILNFDITQTLRWAHQDKHGQGAVSALAYNPDCSRLLAGFAR
GLVIMIDTQSGDVLRNLFDVITPNTGALHIKWTSRPALALCSDSGGSVWSLSFTRKLGIR
GCSSRCLFSGARGEVCTLEPLMIDSSHELDQYCIVALATLSKYFIVTIRPRLKVIKYHAL
QGPADCLPLLAWQMVLIQAADTSRSVDPVIVVGRGNQLFFHQLFMANGRITLLYLRHVQM
QTNLLSVHWLGPKCVACMDISEILHLIDVRSSKELECIDMANAGLVYGSAQFKGLATGGN
VSPALALAGTHACYNSLMSRGTQLYILGARSLHMIAVRTWTERISYLVKNQRWQEACDLA
LDGYRATAERPKRKAQAKERIIMLFKEYLAASARAPDYCLGPIVKCLITIGELDLLWTQL
WDRLQNKSLYLKHITEHIENDNIHRVNPTISQALVDHWLEISPSKLEEIILKLDWTCLDL
NQVLKAAKRHKLYRAQIYLNAHALGDYSSPLTELIPIIAQEPSDLGNTLLVYISSCLAGR
GYPCGEIPADLVQNVKHEVLRCLTSLHSNTSVPNELPYPYLRTLLKFDTRETLNVISLAF
QEKEFSGELGFSHRKRIINILLEIMTPENTTWAEIGCLLNFIAQQISQQCLTPDSQLLEK
VLNHLSKEEIANETARQHSERESAWHELLINNCLDSISNDEEQLQLARRAHCYYVQEYLL
EKLQRYDGIVECYLNNSLRHDTMFSYMERHVRHPERKIYHQIENYLLRMLEINAKETARI
VDFYYSGQINKLVEVAKKDEQSLLTFLEHLHRRRVDLTAEQSEQLLALLCKYKPHEVDDF
VRNADQYRLGEALKLVLSHKLSRAAVYLYEKQGNYKSAFEISIELLSTLHAEEAAVFAQG
ISSLCVRANELLPNKECEKFWFTLLQQILPRDDLKSSTKNMLHLASQHVDLPKLVQLVMN
TRNVSGNFGDIKDLLMSMLSQSRLETDAMEKTLQIRGEELANTFACKRKEVKRGLLVSIM
RCVICQQRLYNQTDILVLGSCGHAMHDKCAAAYSETLEAREHDEISGSTHVENDVSIMSA
SCPQCLSVIESSFYSNLIKLSEPSHTIYQFSEGSHNFHQQQHDILQKGVLRLKAPPRKFT
NN
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagctaaaagcgccgtctctacagtcgctcttggagtcagatcatggatccagc
gatagtttactggcagaatctttgcttgatgtggaagatttagatgatgtggaatattca
attccacctactaataccttgcctacattggagtcagctttaagtgaatttgaagcagac
tctgatatcggctcggaattgggcgtaccagtaccggctccaacgccaacgccctcaata
gcagaggagggtggagttcgcaatggtggtgcgggaggtggaggttctataatgcgttat
gccatgttgcagggtgtctcgacccaaatagcttcagcagcggatcgggtaaatgctgga
cttgccacagcctgcgctgtttctacgttaattgccattggtacatcacacggtcacatt
ctcaactttgatataactcagactttacgctgggcccatcaggacaaacacggacaaggc
gcggtatctgcgttagcatataatcccgattgctcacgacttttagctggttttgctcgc
ggactagtcattatgattgatacacaatccggagatgtgttgcgcaacttgtttgatgtg
atcactccaaacacaggagctctgcatataaagtggacttccagaccagctctcgctctt
tgttccgactctgggggctcagtgtggtcattaagctttacccgtaaattgggcattcgt
ggttgttcatcacgctgcctttttagtggcgcacgtggagaggtttgcaccttggagcca
ttaatgattgacagctcccacgaactagatcagtactgcattgttgctttagctacatta
tcaaaatatttcattgtaaccatacgtccgcggttaaaggtaataaagtaccatgctcta
caaggaccagctgattgtttaccgctgctggcttggcaaatggttttaatacaagcagcg
gatacctcacgctctgttgatccagttattgtggttggtcggggcaaccagctatttttc
catcaactttttatggcaaatggtcgtatcactttgctttatcttcgtcatgtgcaaatg
caaacaaatttattatctgtccattggctaggaccaaagtgtgttgcatgcatggatatc
tcagaaatattacatctaatagatgtgcgctccagtaaagagcttgaatgtatcgacatg
gcaaatgctggattggtatacggatcggctcagttcaagggacttgcgactggcggtaat
gtatcacctgcgttggccttagcaggtacgcatgcatgctacaattccttaatgtcgcga
ggtactcagctgtatatattgggcgcacgatctttacacatgatcgcagtacgaacttgg
actgagcgcatcagctacctggtaaaaaatcaaaggtggcaagaagcttgtgaccttgca
ctggatggttatcgcgcaactgcagaacgacctaaacgaaaagcgcaggctaaagaacga
atcataatgctttttaaagagtatttggctgcttcggcacgtgcaccagattactgtctg
ggacccatagttaagtgtttgataacgatcggagaactggatttgctttggacacagttg
tgggatcgattacaaaataaaagcctatatctaaaacatatcaccgaacacatagaaaat
gacaatatacatcgtgtaaacccaacaatatctcaggctttggtagaccactggttggaa
atatcaccttcaaaattagaggaaataatacttaaactggattggacctgtcttgattta
aatcaggtgttaaaggcagcaaaacgacacaagctttatcgcgcacaaatctaccttaat
gcacatgcgcttggtgattattcaagcccacttactgagctaataccaattatagcacag
gagccttccgatctgggcaatacactactcgtctacatatccagttgcttggcaggtcgg
ggctacccgtgcggtgaaattccagccgatctggttcaaaatgtgaagcacgaagtcctt
cgttgcttaacttccctacattcgaacactagcgttccgaacgaacttccatatccatat
ttgcggactctcctcaaatttgatacacgcgaaacattgaatgtgatttctttagctttt
caagaaaaagaatttagcggagagcttggattttcccaccgcaagcgcatcattaatata
ctgcttgagataatgactcccgaaaacacaacctgggccgagattggctgccttttgaat
tttattgctcagcaaatatcacagcaatgtctaacacctgactctcagctgctggaaaaa
gtactcaaccatttatcgaaggaggaaatagcaaacgaaactgctcgccaacattcagaa
cgagagagcgcatggcatgaactgctaattaacaattgtctagattcaataagtaacgat
gaggaacagctgcagttggccagacgagcgcattgttactatgttcaggaatatctatta
gaaaaattacagcgttacgatggcattgtcgagtgttatcttaacaatagcctgcgtcac
gataccatgttcagctatatggagcgacacgttcgccatcctgagcgtaaaatataccac
caaattgaaaattatttgctgcgcatgctggaaatcaacgccaaggaaacagcgcgaatc
gtagacttttattatagtggacaaataaataaacttgttgaggtggctaagaaagatgaa
cagtcgttattaacatttttggaacatttacatagacgacgagttgatttaacggcagag
caaagtgagcaacttttggcacttttatgtaagtataaaccacatgaggtggatgatttt
gtacggaatgctgaccaataccgcctgggagaggcgctaaaactagtattatcgcataaa
ctcagcagagcagcggtttacctgtatgaaaaacaaggaaattataaatctgcattcgag
atatccatagaattattatctacattgcatgctgaggaagcagctgtatttgcgcaagga
ataagcagtctgtgtgtgcgagctaatgaattactgccaaacaaggaatgtgaaaaattt
tggtttacattactgcagcaaatcctgccgcgtgatgatctcaaatctagtactaagaat
atgttgcacctagcatcacagcatgtcgatttaccgaaacttgtacagctagttatgaat
actcgaaatgtatcaggaaatttcggtgacattaaagatttgctaatgagtatgctctca
caatctcggctggaaacggatgcaatggaaaagacacttcaaataagaggtgaggaacta
gccaatacatttgcatgtaaacggaaagaagtcaagcgcggacttttggtgtcaataatg
cgttgtgtcatttgtcaacaacgtttgtacaatcagactgacattctggtcctaggtagc
tgtgggcatgctatgcatgacaaatgtgcagcggcatacagcgaaacattagaagcgcgg
gaacatgatgaaatttccggatctacgcacgttgaaaacgacgtatccataatgagcgct
tcgtgtcctcaatgcctttctgtgatagaaagcagtttctacagtaatttaattaagcta
tcagagcccagccatacgatttatcaattcagcgagggaagtcataattttcatcagcag
cagcacgacattctgcaaaagggcgtgttaagattgaaggcaccaccgcgaaaatttaca
aacaactaa
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