Rhagoletis zephyria (snowberry fruit fly): 108377551
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Entry
108377551 CDS
T08513
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108377551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108377551
Spliceosome [BR:
rze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
108377551
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-CCCH_7
Motif
Other DBs
NCBI-GeneID:
108377551
NCBI-ProteinID:
XP_017489306
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSKRKLEEEEEVVESEEDDKLYLNRKVDERSHQCPYLDTINRGVLDFDFEKLCSISLSKI
NCYACLVCGKYFQGRGIGTHAYLHSVSCGHHVFLNLQTLKFYCLPDNYQIIDSSLDDIIY
VLKPTFTVTEINELDNNSKPSIAYDGTSYLPGIVGLNNIKQNDYCNVILQALSHVKVIRN
FFLLDSNLDAFGQKRSDLLVQRFGELLRKLWNPKNFKAHVSPHEMLQAVVLYSQKKFQIT
QQGDPILFLNWFLVSLHKHKHLEVKGPKGSSSIIHKTFLGSMKTYTRKVIPIDRSIEEKL
ALMESKEYGEKCEEGQFLYLTLDLPPTPLFRDEMSENIIPQVPLSHLLAKFDGITEKEYK
TYKDSFLKRFVITKFPKYLILYIKRFNQNTFFLEKNPTIVNFPVKNVDLSELLEPESRKD
QNACYDLIANIVHEGAPESGKGTYRIHLLHKGTGKWFEIQDLHVNEILPQMITLSESYIQ
IWEQLPSVD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaaagttagaagaagaagaagaagtggtcgagtcggaagaagatgacaag
ctttacctgaaccgaaaagtcgatgagcgaagtcaccagtgtccatacctggatacgatt
aatcgaggcgtgctggattttgattttgaaaagttgtgctcaatttccctttcaaagatc
aactgctacgcttgtcttgtttgtggaaaatactttcaaggtcgaggaattggcacgcac
gcatacttgcattcagtctcatgtggccatcatgtatttttgaacctgcaaactctcaaa
ttttactgcttgcctgacaattaccaaatcattgattcttcacttgatgacatcatctac
gttttgaaacccacttttacagtaactgaaattaatgagctggacaacaatagcaagccc
tctatcgcatatgatggcacatcatatctacccggcattgttggattgaataacatcaag
caaaatgattactgtaacgttattctccaggcactgtctcacgtgaaagttattcgcaat
ttctttctgttggacagtaacctcgatgcattcggacagaaaagatcagatttgttagtg
cagcgatttggagaacttttgcggaagttgtggaatccgaaaaactttaaagcacatgtt
tcgcctcatgaaatgcttcaagcagtggttttgtactctcaaaagaagtttcagataacc
cagcaaggtgatccaatattgtttctcaattggtttctagtttcccttcacaaacacaaa
caccttgaagtaaaaggtcctaaaggcagctcttcaatcatccacaagacgtttttagga
tccatgaaaacgtacactcgtaaagtgattccaattgatcgttccatcgaggagaaactg
gctctaatggaaagcaaagagtatggagaaaagtgtgaagagggccaatttctgtatctt
acactggatcttccacctacgcctctctttcgcgatgaaatgagcgagaacattattcct
caagttcctctaagccatttgcttgctaagtttgacggaataaccgaaaaagagtacaaa
acgtacaaggactcttttctcaagcgcttcgttattaccaaattcccgaaatatctcatt
ctgtacatcaagcggtttaaccagaacacgttttttctcgagaaaaatcccactattgtc
aactttccggtaaagaatgtcgacctatcagagctacttgagccagagagtcgaaaagat
caaaatgcttgctacgatctcattgcaaacattgtccacgaaggtgcgccagagtccggc
aagggcacctatcgcattcaccttctacataagggaactggcaagtggtttgagattcaa
gatttacatgtaaatgaaatactgccgcagatgattaccctgtcagagtcgtacatacaa
atctgggaacaattgccaagtgttgactga
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