Rhagoletis zephyria (snowberry fruit fly): 108377557
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Entry
108377557 CDS
T08513
Name
(RefSeq) nipped-B protein-like isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108377557
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108377557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
108377557
NCBI-ProteinID:
XP_017489312
LinkDB
All DBs
Position
Unknown
AA seq
2196 aa
AA seq
DB search
MNMTDPDIPSVPVTTLACLTSLSDLLSELPVPDTLASVTSLNKSLLFHTLVAKESNNLLS
VRDDNLVKQLVHAIEQTNSEIIELKPQYAIEQFGTNINTYPELLQGIYSYSPTVFNTNNG
KINQQKNNRQQTHQQQQQQWYNVVHGQRGSNATLQSEDLQRLQQQMPLNVNNATITNNPS
SGSFPTMEMTSMQNNNFDVQTPINHKVQHPITDRKQTLPGEQQKAGFENVACFQNTSTFS
TPLNSTSCETKPSQIEQKANPAIPNTLQPTVIHTQNYQNPNSALMPDNPSTAMPIGNVQY
QANNGYTQQNVTVQAPTVQAPAVQATVIQATVAQATAARAIAAQGMAVQAPVVQATAAQG
TTARGIAARGIAAQATVVQTSASQGAAARAIAAQGTVAQAMALQAPAVKATTAQAPVAQA
HPVQSPAIQAPAAQARRVQAPAVTATSVKAPAVQARPLQAPAVQTPAVQAPAVQTLAAPV
AGEEKQSSDPILVPIKNEFIMPDPKPNTCVSSKPSEKSNVRVCINRLKEKDASLMQQSIK
QFVKKSPESARKFGLVTPNKVEPPAPTPTSASGDAQAPPSTDQKFQKLTTKAAENDDAFT
LMKTNEKPLAMKRKLAPSVDEVPPEQIHSQPKLRCVERIVSTPSAKCTKDEILRSQTYQQ
FMRNLEQIIETLDDTEVPNFDTDDVDENIECISSRMLNIMSNDIAKLKAKYVLDVIPKTK
LAQLVNYAMRNVYLAKNYSASPDDEDDIMDDEIMEKILNGIEACLLICNIYCTSKDIKFL
QEDNIALIIKFMHFQFRETIFPSYDPVYTVKSMKKADNRKKSKIYQNYNRSLQLLYSKAT
ELMKVFVTLFDRYIFVDTIILPLSTLSIEPFFVDNIETLQFVCLELVTTLFRKEEYVKIR
SSILGDILTSIDRLPSSKKNLRPFKLINNSGNIQMVTALVLQLIQCVTILPDVMNSNSHN
KRKSLPQYGELASQASSFSTQTDRQNIDVIVLKKYDVAISIGGNFLTTFLNKCKSRSNET
DFRPIFENFIYDLLATVNKPEWPSSELLLSLLGTMLVRYVSDKSIEQSIRLVSLDYLGIV
AARLRKDAVDSRYKVNVIDSMIRYIKVEQEKEGDLPSSNNKVELKEDERVEFLQKILLDF
LAANAHVDNPIWDYARHFYLTQWYRDIIYQRRNINEGAKRDTSRKKSSRKRRTNADLSGS
DSDDDSGDDINFVNVDSRVGGDCTMGNQELNMERFNLLDKRKQCLVNNINPYSTLGDSNH
AQHIKTYIDYNNAHLIAQYLASKRPFSKSFDGYLKKIILVVNEPSIAIRTRAMKCLANIV
EVDPMVLRRKDMQMGVNQKFLDAAISVREAAVDLVGKFVLSNEELIDQYYDMLSTRILDT
GVSVRKRVIKILRDICIEYPTFQKIPEICVKMIRRVNDEEGIQKLVTEVFMKMWFTPLHK
NDKDGIHLKINQIIDVVNIAHDTGTAWLEGLLNSIFQPKESNAKGDDSMKDNLQKKTEPP
ADILLSCQQLADGLVGRLIELEDTDNTRMLGCITTLHLLAKVRPQLLVQHAITIEPYLNI
KCHPTTAPKFICAVADILEKVVPLVNNASESFLASLEEHLMLLVVSLNQAVVKSCVSCLG
AIVNKITKNYALIRDCFQKFYRILDQTRNQILQNRQINNLSAAIRRSLFTIGILMRYFDF
KSKEVIGESNSLSPTICNDVFDCLMFFAQYQNYDIRKEALIALGSFCVMNDDYLTNTKLK
RYYCDLLLSETSDAGIKIICLRNIWIYLTESEMHMYNKEKDWDKQSKTEDLKEMNDVSSG
MSSRIIQLYLQEIFECFLNSDDNVRLWAVKVIQIVLRQGLVHPVKTVPYLICLSTDSKLE
SAHRADALLKDIDKMYNGFVNMKAQLGLQFSFRLQRILQQNVKGKGSKVIRGYVKRNLDT
MPTALNDFLYTLLRAVKTQRRALVQTIVKQFDDQKTSLQQMLYVADNLAYFPYAVQDEPL
YLIHQVDLLISIVGTNLLTTFKENLKPSVNVGDVLEDDDDEDDPEVLFKRLPENAFEMQK
CIMSSQACMLLLILKDHLKHMYSLTDSKISRYSPSEPKLYEKAVVRKTVQDFNPKTTIDI
IKKQQETMLASDVANSKINLNDDERMDLVIKYLDFKKLMLKLDPDDEDSDDESRNKSKLN
TTANTTQLNSSSASANKSTDDSCLDVDKSMNRENLT
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaccgaccccgatattcccagtgttccagtaaccactttggcttgtttgaca
agtttgtcggacttactaagtgaacttccagtaccagacacactggcaagtgtcacgtcg
ttaaataaatctttgctattccatacactagtggctaaggaatccaataatttgttgtcc
gtgcgggacgataacctcgtgaagcaattggttcatgctatcgaacaaacgaactctgaa
ataatagaacttaagccccagtatgccattgaacaattcggtaccaatataaatacttac
ccagagttgcttcaaggcatttacagctacagtcccactgtgtttaataccaataatggt
aaaataaatcaacagaaaaataatagacaacaaacgcatcagcaacagcagcaacagtgg
tacaatgtagtacatgggcaaagaggcagcaacgcaacgttgcaatctgaggatctgcaa
cgtctgcaacagcaaatgccattgaatgtaaataacgcgactataaccaacaatccatca
agtgggagttttccaacaatggaaatgacttccatgcaaaataacaatttcgatgtccaa
actcctatcaatcataaggtccaacatccaataacggaccgaaagcaaacacttcctggg
gaacagcagaaagctggcttcgaaaatgtagcgtgtttccagaacaccagtactttttcg
acaccgttgaattcgacatcgtgtgaaacaaaaccaagtcaaatcgaacaaaaagctaat
ccagcgattccgaacacattgcaaccaactgtaattcacacccagaactatcaaaatcca
aattctgcactaatgccagacaacccttccacagcaatgccgattggcaatgtccaatac
caagctaataatggttatacccaacagaatgtcactgtccaagcaccaaccgtgcaagct
ccagctgtccaagcaacagttatccaagcaacggttgcccaagcaacagctgcccgagca
atagctgcccaaggaatggctgttcaagcaccagttgtccaagcaacagctgcccaagga
acaactgcccgaggaatagctgcccggggaatagctgcccaagcaacagttgtccaaaca
tcagcctcccaaggagcagctgcccgagcaatagctgcccaaggaacagtcgcccaagca
atggctctccaagcaccagctgtcaaagcaacaactgcccaagcaccagttgctcaagca
catcctgtccaatctccagctatccaagcaccagctgctcaagctcgacgtgtccaagca
ccagctgtcacagcaacctctgtcaaagcacccgctgttcaagctcgacctctccaagcg
ccagctgtccaaaccccagctgtccaagcaccagctgtccaaacattagctgctcctgtg
gcaggtgaagaaaaacaaagtagcgacccgattttggtacctattaagaatgaattcata
atgcccgatcccaagcctaatacctgtgtgagcagtaaacccagcgagaaatccaatgtt
cgggtatgtataaatcgacttaaagaaaaggatgcatctctcatgcaacaaagcataaaa
caatttgtaaagaaatcaccagagtctgcaagaaaatttggtttggtaactccaaataaa
gtggagccaccagcaccaacgccaacgtcggcgtcgggagatgcccaagccccaccttca
acagatcagaaatttcaaaagttaactacgaaagcagctgaaaacgacgatgcgtttact
ttaatgaaaacgaacgaaaaaccactcgcaatgaaaaggaagctagcgccttcagttgac
gaagttccacccgagcaaatacactctcagccgaaattacgttgtgttgagcgcatcgtt
tctacaccatctgcgaaatgtacgaaggacgaaatattgcgatcacaaacctatcaacaa
ttcatgcgaaatttggagcaaatcattgaaacgctggacgacacagaagttccgaatttc
gatacggatgatgtagacgagaatatcgaatgtatatcatctagaatgcttaatataatg
agcaacgatatcgccaagttaaaagcaaagtatgtattagatgttataccgaaaactaag
ttggctcaactggtcaattacgctatgcgaaatgtctatttggccaagaattattcggca
agcccagacgatgaagacgatattatggacgacgaaataatggaaaagattttaaatgga
atcgaagcttgcctccttatttgcaacatttattgtacttcgaaagatataaaatttttg
caagaggataacattgcgctcattataaaatttatgcattttcaatttcgtgaaacaatc
tttccatcatatgatcccgtatatacagtaaaaagtatgaaaaaggcggataatcgtaag
aaatcgaaaatttatcaaaattataatcgcagcttgcagttgctgtactcaaaagccacc
gagctaatgaaggtcttcgttacactcttcgatagatatatatttgtggataccatcatt
ttgccactttccaccttatcgatcgaaccgttctttgttgataacatcgaaaccttgcaa
tttgtgtgcctggaattagtcacaaccctatttcgaaaggaggaatatgtcaaaattcgc
agcagtatactaggtgatatattgacctccattgatcgtttgccgtcttcgaagaaaaac
ctccgacctttcaaattaatcaacaatagcggcaacattcaaatggtcaccgcattagtg
ctccaactaattcagtgcgttactattttacccgatgttatgaatagtaattcgcataac
aaaagaaaatcattaccacagtatggtgaactggcgagtcaggcatctagtttctcaaca
caaaccgatcgtcaaaatatcgatgtgattgttttgaaaaaatacgatgtcgctataagc
ataggtggcaattttctaacaacatttctaaataagtgcaaatctcgctccaatgaaact
gatttccgtccaatatttgaaaattttatctacgatcttctggcaaccgtaaacaaaccc
gaatggccatcatccgaattattgctttcacttttgggaaccatgcttgtacgttatgta
tccgataaatctatagaacaaagtatacgcttggtttccttggattatttgggcattgtg
gctgcgcgtttgcgtaaggatgccgtagactctcgctacaaagtgaatgtcattgactca
atgatcagatatattaaagtggagcaagagaaagagggagatttaccatctagcaacaac
aaagtcgaactaaaagaggacgaacgggtggagtttctgcaaaagatcctcttagatttc
ctagccgccaatgcacacgtggacaatcccatttgggattatgctcgacatttctatttg
acccagtggtatcgtgatataatttatcagcgtcgtaatatcaatgagggcgcaaagcgc
gatacatcacgaaagaagagctcacgtaaaaggcgtacaaatgccgatctctccggcagt
gattcagatgatgacagcggtgatgatattaactttgttaatgttgatagccgtgttggc
ggtgattgtactatgggcaatcaggagctgaatatggaacgattcaatttgcttgataaa
cgcaagcaatgcttagtgaataatataaatccatattcaacactgggtgattccaatcat
gcacaacatattaaaacatatatcgattataataatgcacatttaatagcacaatatttg
gctagcaaaagaccatttagtaagtcatttgatggctacctcaaaaagatcatattggtt
gtaaatgagccgtcgattgctataagaacgcgtgcgatgaaatgcttagctaacattgtc
gaagttgatcccatggtactcagacgcaaggacatgcaaatgggcgttaaccaaaagttc
ttggatgcagcgatatctgtgcgtgaggcggccgtcgatttggttggcaaattcgtgctg
agcaacgaagagctaatagaccagtattatgatatgttatcgactagaattttggacact
ggtgtgtcggtgcgcaagcgtgtaataaaaattcttcgcgatatatgcatagagtatccg
acgtttcagaaaattccggaaatatgtgtgaaaatgataagacgcgtcaacgatgaggaa
ggcatacaaaagctagtgacggaggttttcatgaaaatgtggtttacgccgttgcataaa
aatgacaaagatggcatacatttgaagataaatcagattatagacgtggttaatatagca
cacgacacaggcacagcttggttggaagggctgttaaatagcatatttcagcccaaagaa
agtaatgcgaagggcgatgatagtatgaaagacaatttgcagaagaaaacagagccgccg
gctgacattttgttgtcgtgtcagcagttggcagacggtctggtggggcgtttgatcgag
ctagaggacaccgacaatacgcgtatgttgggctgcataaccactctgcatttattggcg
aaggtacgtccgcaactgctggtgcaacacgcaatcactatagagccttatttgaacatc
aagtgtcacccgactacagcaccaaaatttatttgcgctgtggcagatatactggaaaag
gttgttccactggttaataacgctagtgagtcgtttttggcttcgctggaagagcatttg
atgttactggttgtttcacttaatcaagctgtagtaaagagctgtgtctcttgcttgggt
gcaattgtcaacaaaataacgaagaactatgcgttgataagagattgctttcaaaagttt
tatcgcattttagatcaaactagaaatcaaatattgcaaaacagacagattaataattta
agtgcagctattcgccgtagcctcttcactattggcatactaatgcgttatttcgatttc
aaatcgaaagaggtcataggcgagtccaactctttgtcaccaacaatatgcaacgatgtg
tttgattgcctgatgttctttgcacaatatcaaaattacgatatacgcaaggaagcgttg
attgccttgggctcattttgtgtgatgaacgatgactatctaacgaatactaagttgaag
cgctactactgcgacttgttgctttcagaaacgagtgatgctggcattaaaattatatgt
ttgcgcaacatttggatctatctgactgagtcggaaatgcatatgtacaacaaggagaag
gattgggacaaacagtcgaaaaccgaggatcttaaagaaatgaacgacgtgtcatcgggc
atgtcaagtcgtatcatacaactatatctacaagaaatcttcgaatgtttcctaaacagt
gatgataatgtgcgactgtgggctgttaaagttatacagatcgtgctccggcaaggcctt
gtacatcctgttaagactgtgccatatcttatatgcttaagtacagattcgaaactcgaa
tcggcgcacagagcagatgctttgttgaaagacatcgacaagatgtacaatgggtttgtg
aatatgaaagcgcagttgggactacagttcagctttagattacagcgcattttgcagcag
aatgtcaaaggcaagggcagcaaagttatacgtggctatgttaaaagaaacttggataca
atgccaacggcgctgaatgatttcttatacacacttttgcgtgcggttaagacgcagcga
cgcgcgctcgttcaaacgatcgtaaagcaatttgatgatcaaaaaacttcgctgcagcaa
atgttatatgtagcagataatttggcttacttcccgtatgcggtgcaagatgagccactc
tatttgatacatcaggtcgatttactcatttcaattgttggtactaatttgctcacgact
ttcaaagaaaatcttaaacctagcgttaatgtgggggatgttctagaggacgatgatgat
gaagatgatcctgaagtgttattcaagcgtctgccagaaaatgcatttgaaatgcaaaag
tgtataatgtcttcacaagcgtgtatgctgctattaattctaaaggatcatctaaaacat
atgtatagtctaacagatagtaaaatatcaaggtactcaccgtcggaaccgaagttgtac
gagaaggcagtagttcgtaaaaccgttcaagattttaaccccaaaacaacaatagatatt
attaagaaacaacaggaaacgatgttggcttccgatgttgcaaatagtaaaatcaattta
aatgacgacgaaagaatggatctggttataaaatatttagactttaaaaaactcatgctt
aaactggatcccgacgatgaggattcagatgacgagagtcgcaataaatcgaaactcaat
acaacagctaatactacacagctgaactcgagttcagcgagtgcaaataagtctacagat
gacagctgtttagatgtggataaatcgatgaatcgggagaatttgacttaa
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integrated database retrieval system
