Rhagoletis zephyria (snowberry fruit fly): 108377777
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Entry
108377777 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108377777
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Fib_alpha
bDLD2
Motif
Other DBs
NCBI-GeneID:
108377777
NCBI-ProteinID:
XP_017489538
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
WSLLPEMDDKGDDNDDEYDAEPCKKVAIICSDPTPSDPTITPSANTFTLFKLKPKLKRLG
CNKECSIFLFQLSILSFQVDQLDGSAHAWTFNLLISLHHPFAAIPGRCDEYQACYPATGN
LLIGREDRLQASSTCGRTDKVRYCVVSHLKEKKKCFLCDSRPRHKGTNKYHGIENVVSTX
YWWQAENGVENVTIQFDLEAEFHFTHLVITFKTFRPAAMLIERSHDFGRTWQVYQYFAAD
CASSYPGVPTGARLKITDVVCDNSYSGVEPSTEGEVIFRVLPPTIRIEDPYKKDVQDILK
ITNLRIRFEKLHNLGDNLLDPRNEIKEKYYYSIYDIVVRGSCSCYGHASRCKADGDAVIT
DMVYGRCECTHHTKGLNCELCEELYNDLEWKPAFGRQTNACQRCNCNNHASRCHFDKAVY
AASGNVSGGVCEDCQHNTMGKNCDRCKPFFFRDSARSLEDPYVCQECDCDPRGSEEQGLC
DEVTDLEANMEAGKCHCKENVEGRRCDHCKRGFWNLNELSPKGCIECSCSLLGTVDNLGC
NVNTGECICKRNVVGRDCNSCAPHYYGLSADEEGCKYCDCDPGGAYSNDCDQQTGQCSCR
PHVTGRRCDRPEEGYFVPGLDHRTLEAEEAKVVGGSPQPLPRQPYGDRQLSWSGTGFMRL
HPLSAIEFTLDGVPESKLYDLVVRYEPQVSGRWENVVLNIRRQGFGGGACSNYTGPDQEA
QRLELSSSSREAAATSVCLEKGLRYILTLEVKDFERPITDGGEAPSVLIDSIAVIPRPDD
IPFFTGTPENDRRRIEFERFRCYTTYYSLNRAPEPDEYCRRMLMSVGFYVFDGAKPCDCD
TTGSTSAVQCATLGGQCACKVHVAERTCNRCHIGYYGFGPDGCKPCDCHGYGSLDNFCDK
STGQCSCRTGTFGRACDECQPGYWNYPNCQRCSCNGFSELCDSKTGACVDCREATAGVSC
EECAAGYYGDPLGRRTGLTVPCRQCPCPDVAGSWISHAATCELDPGTQNVLCHCAPGYSG
EKCDRCSENYYGKPNTVNGTCEECRCNANIDVAVPGSCDPADGRCLKCLYHTAGDGCEIC
EPGFYGNALEHSCAACVCNQLGTDERSAFCNQTTGQCACLPNVRGLGCDSCEEDHWNLAS
KKGCEACDCDAQGSYSLKCNELDGQCHCKPTHGGRRCNECLPNHWGDPRVQCQQCDCNLS
GSLSTQCDKATGYCVCVPGISGPRCDRCARGFTGTAPHCEACGECFENWDLIIGKLKNET
LGLLDKARIIKMTGTTGAYTRQFTQIEENLKEVEKILQGQDINEVDLEQVQHMISEAREN
LLELQDILATHEKHIEDTKTGVIKTNIKLDELTAAAKRLKIEAEELKEEATKLQEGNVEG
AYNITKDSKRRSQAAWQRVLDSGNILKESETKRRNTESLIDQARSKHNATYLENEGALGA
VQVEISKMELGLPRINELVCDGQSTMDKCDTLCGGAGCGRCGGVSCTEGARTKAENALGM
AVKAEGKLAERDREAKDELRRITDARVKAEEALAEAKAAFERIMAAKNASTETALEVKDL
LEKIDYFLAGSAATPAELRTLAEACKGMEISLDPKQIEELALEINRTIAGLKDIDRILEE
TKDAVLRANDLKIRADLAKQKSDGILAEAESVRKALEEARQAQEKAKQSIEEANGDIGTI
DKDLNEIYNGAETAKGNARSATEGIQGLNDRLDNLKKKYASNKFKIDNAENESRSAKELA
EQASRGADELEKKYQSAFGKLDQKSQVSESLKKRAQDLKDNASKLFTNVSSKLKKIEEFE
YSIENNERKLNDLQKVVADLNSQMKNHLDHIEDKAKNYRDCQA
NT seq
5534 nt
NT seq
+upstream
nt +downstream
nt
agtggagtcttttaccggaaatggatgacaaaggtgatgataatgatgatgaatacgatg
cggaaccctgtaaaaaggtggcaataatctgcagtgatccaactccaagtgatcctacta
tcaccccaagtgcaaatacgttcactctgttcaagctcaagcccaagctcaagaggctag
gatgcaataaagaatgttctattttcctatttcaattatcaattttaagttttcaagtgg
accaactagatggaagtgcacacgcctggacattcaatttactaatttctcttcaccatc
cctttgcagccattccgggccgctgcgacgagtaccaggcctgttacccggccaccggaa
acctgctgatcggccgcgaggaccgcctgcaggcgagcagcacctgcggtcgcactgaca
aggtccgctactgtgtggtcagccacctgaaggagaagaagaagtgcttcctctgcgact
cacggccccgccacaagggcaccaacaagtaccacggcattgagaatgtcgtctccacgt
aatactggtggcaggcagagaacggcgtcgagaacgtgaccattcagttcgacctggagg
cggagtttcacttcacccacctggtcattaccttcaagaccttccgcccggcggcgatgc
tcatcgagcggtcgcacgactttggccgcacctggcaggtctatcagtactttgcggccg
actgcgcctccagctacccgggcgtcccgaccggcgcccgcctgaagatcaccgacgtcg
tctgcgacaactcctactcgggcgtggagccctcgacggagggcgaggtgatctttcgcg
tcctcccgccgaccattcgcattgaggacccctacaagaaggacgtgcaggacattctga
agatcaccaatctacggattcgctttgagaagctgcacaacctgggcgacaacctgctcg
acccgaggaatgagatcaaggagaagtactactactcgatttatgatatcgtcgtgcgag
gaagttgttcctgctacgggcacgccagtcgctgtaaggcagatggagatgcggtcatta
ccgatatggtctacgggcggtgcgagtgcacccaccacaccaaggggctgaattgtgagc
tctgtgaggagctgtacaatgacctggagtggaagcccgcttttggacggcagacgaatg
cctgtcagagatgcaactgcaacaaccacgccagccgctgtcactttgacaaggcagtgt
acgctgcctcgggaaacgtctccggcggcgtctgcgaggactgccagcacaatacgatgg
gcaagaactgcgaccgctgtaagcccttcttcttccgcgacagtgcccggtcgctggagg
acccctacgtttgtcaggagtgtgactgcgacccgcgcggctctgaagagcagggcctct
gcgacgaggtcacagacctggaggcgaacatggaggcgggcaagtgccactgcaaggaaa
atgtggagggtcggcggtgcgaccactgcaagcgcggcttctggaacctcaacgagctca
gtccgaagggctgcatcgagtgcagctgcagcctgctgggcacggtggacaacctgggct
gcaatgtcaataccggggagtgtatttgcaagcgaaatgtcgtcgggagggactgtaata
gctgtgcgccgcactactacggcctgagcgccgacgaggagggctgcaagtactgcgact
gcgacccgggcggcgcctactcaaatgactgcgaccagcagaccgggcagtgcagctgtc
gaccgcatgtgaccggaaggcggtgtgaccgacccgaggagggctactttgttcccggcc
tggaccaccggaccttggaggcggaagaggcgaaggtggtgggcggaagtcctcagccgc
tcccccggcagccgtacggcgaccggcagctgagctggagcggcaccggctttatgcgcc
tccacccgctgtcggcgattgagttcacgctggacggcgtgcccgagtcaaagctgtacg
acctggtagtgcgctatgagccgcaggtgagcggccgctgggagaatgtggtgctcaaca
ttaggcggcagggctttggaggtggagcctgttccaactacactgggcccgatcaggagg
cgcagcggctggagctgtcctcttcctcgcgggaggcggctgccacttccgtctgtctgg
agaagggcctgcgatacattctcacgctggaggtgaaggattttgagcggccgataacgg
acggcggtgaggcgccctcggtgttgattgattcgatcgccgtcatcccccgacccgatg
acattcccttcttcacgggcacgccggaaaacgaccgccggcggattgagtttgagcgct
ttcgctgctacaccacctactactcgctgaatcgggcccctgagccggatgagtactgcc
ggcggatgctgatgagcgtcggcttttacgtctttgacggggcgaagccctgcgactgcg
acaccaccggctccaccagcgccgtgcagtgcgccacgctgggcgggcagtgcgcctgta
aggtgcacgtcgccgagcggacctgcaaccgctgtcacattggctactacggcttcggcc
cggatggctgcaagccctgcgactgccacggctacggctcgctggacaacttctgcgaca
agagcaccgggcaatgtagctgccgaacgggaaccttcggccgtgcctgcgacgagtgcc
agcccggctactggaactaccccaactgccagcggtgcagctgcaacggcttcagcgagc
tctgtgactcgaagaccggcgcctgcgtcgactgtcgcgaggcgacggcgggcgtcagct
gcgaggaatgtgccgccgggtactacggcgatccgctgggccggcggaccgggctgaccg
ttccctgtcggcagtgcccgtgtccggacgtggcgggcagctggatcagccacgcggcga
cctgcgagctcgatccgggcacgcagaacgtcctctgccactgtgcgccgggctacagtg
gggagaagtgcgatcgctgttcggagaactactacggcaagccgaatacggtgaacggaa
cctgcgaggagtgccgctgcaatgccaacattgacgtggcggtgccgggcagctgcgacc
ccgcggacggccgctgtctgaagtgcctctaccacaccgccggcgacggctgcgagattt
gcgagccgggcttctacgggaatgcactcgagcacagctgcgccgcctgcgtctgcaatc
agctgggcacggatgagcggagtgccttctgcaaccagaccaccgggcagtgcgcctgtc
tgcccaatgtgaggggcctagggtgcgacagctgcgaggaggaccactggaatctggcga
gcaagaagggctgcgaggcgtgtgactgcgacgcccagggcagctactcgctgaagtgca
acgagctggatgggcagtgtcactgtaagccgacgcacggggggaggaggtgtaatgagt
gtctgccgaaccactggggcgatccgagggtgcagtgtcagcaatgcgactgcaacctct
ccggctctctttccacccagtgcgacaaggccaccggctactgtgtttgcgtgcccggaa
tcagtgggccccgctgcgaccgttgcgctcgtggctttaccggaacggcgccccactgtg
aggcctgcggcgagtgctttgaaaattgggacctcatcattggaaagctgaagaacgaga
cgctgggcctgttggacaaggcccggatcatcaagatgacgggcacgacgggcgcctata
cgcgccagtttacgcagattgaggagaacctcaaagaggtggagaagattctccaggggc
aggacattaatgaggtcgacctggagcaggtgcagcacatgatctcggaggcgcgggaga
acctgctggagctgcaggacattctggcgacgcatgagaagcacattgaagacacgaaga
cgggcgtcatcaagacgaacatcaagctcgatgagctgacggcggccgctaaaaggctga
aaatcgaagccgaagagctgaaggaggaggcgacgaagctgcaggagggcaacgtcgagg
gcgcctacaacatcaccaaggactcgaaacggcgctcgcaggccgcctggcagcgggttc
tggacagcggaaacatcctcaaggagtcggagacgaagcgccggaacacggagtcgctga
ttgaccaggcccgctcgaagcacaatgcgacgtacctggagaacgagggcgccctggggg
cggtccaggtggagatcagcaagatggagctgggcctgccgaggatcaatgagctggtct
gtgatgggcagtcgacgatggacaagtgtgacacgctttgcggaggggccggctgtgggc
ggtgcggaggcgtcagctgtacggagggcgcccggacgaaggcggagaacgccctgggaa
tggccgtcaaggcggagggaaagcttgcggagcgggaccgggaggcgaaggacgagctcc
ggcgaatcaccgacgcccgcgtgaaggcggaggaggcgctggcggaggcgaaggcggcct
ttgagcggatcatggcggcgaagaacgccagcacggagacggccctcgaggtgaaggacc
tgctggagaagattgactacttcctggcgggctcggcggcgacgccggcggagcttcgga
cgctggcggaggcctgcaagggcatggagatcagtcttgatccgaagcagattgaggagc
tggcgctggagatcaaccggacgattgccgggctgaaggacattgaccgcatcttggagg
agacgaaggatgcggtgctgcgggcgaacgatctgaagattagggctgatttggccaagc
aaaaatcggacggcattctcgccgaggcggagagcgttaggaaggccctggaggaggcgc
ggcaggcgcaggagaaggcgaagcagtcgattgaggaggccaatggcgacattggcacca
ttgacaaggacctgaacgagatctacaacggcgccgagacggcaaagggcaacgcccgtt
cggccactgagggcatccaagggctgaacgaccgcctggacaacctgaagaagaagtacg
ccagcaacaagttcaagattgacaatgcggagaatgagtcgcgcagcgccaaggagctgg
cggagcaggccagtcggggcgccgacgagctggagaagaagtaccagtccgcctttggca
agctcgaccagaagtcgcaggtgagcgagtcgctgaagaagcgcgctcaggacctgaagg
acaacgcctcgaagctcttcaccaacgtgtccagtaagctgaagaagattgaagagtttg
agtactccatcgagaacaacgaacggaagctcaatgatctgcagaaggtggtggccgatc
tgaacagccagatgaagaaccacctggaccatatcgaggacaaggcgaagaactaccgcg
actgtcaggcgtag
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integrated database retrieval system
