Rhagoletis zephyria (snowberry fruit fly): 108377801
Help
Entry
108377801 CDS
T08513
Name
(RefSeq) homeotic protein spalt-major isoform X1
KO
K19871
sal-like protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108377801
03036 Chromosome and associated proteins [BR:
rze03036
]
108377801
Transcription factors [BR:
rze03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108377801
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108377801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-met
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_11
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-H2C2_5
Zf-C2H2_ZNF451
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
108377801
NCBI-ProteinID:
XP_017489587
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MKNHISTVLCEMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSAEKDDTSDQEENG
ACCSPIASQEVASNNTTDPATTATTTMTALDVLATPLHSAIGNDLSVAAAQAQDCTQSAA
DVAENSTTTEADTAAAAAAAAHDVALNEDHNHNNTRNSNSNSNSSANSVLMSGASPTRLE
QARGTTPVERLLQLKSLADAAVVAKTMAGGDSAASAISAAGSPAYNTYPADNACVTNNSK
FDSPTHMDAEKQARAQLYVAVGAAKKRRASAMEDEDNNGNDNEEADGDGAEEAQVKPATE
RLAVKQLTSESPANLATPKTSGSVSSNAVAAGESDDNLAKPISASLTPTSSALAAASALP
QAAAAAAAFGAAPVNLEAIQNMQMAIAQFAAKTIANGAQGGDNDAAMKQLAFLQQALFNL
QQQQLFQIQLIQQLQSQLAMNQPKGSSDGAEAGDCEEMEEEREDGEEDTYEEEERIAEME
LRQKAEARMAEAKARQHLINAGVPLLDENAGGTTKPSTSGGASGSSGAAESLKRKREDDE
DADAFSVATRRMSVEVTTRASAEGARLSEQIPTSSDALSKLKALENMPLPYGSDLASTII
TNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNMADEFAFRDKNGDGKNRNEPFFKHRC
RYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNAT
PIPEHLDKFHPPLLDQMSPDSSPTHTPAALPQQMPQQMPPVSLPLPFPPGAAFPGLPGLY
RPPMELLKSLGNAGFPNPFFPHMPPVGQSRAETPATRHASKESNQDMPTDLRKSSASNSP
GLPVKTEITEEEKKEVRAEAQKATKSRPSESANVATPQDAAPALDIKIKEERIDTDSQDE
EMERADTPPAQRATTPARTSLSPSQRCASAPFTPPTPTSRPLTMPPVVQPAQPPMSRHPH
PSPGAHNHIDHLPTPGQLPPSLHHRDDFFAERFPLNFTKNLSPEHHSPIRSPAHLQRSPF
FNPINHEMALLPRPHSNDNSWENFIEVSNTSETLKLKELMKNKKLSDPNQCVVCDRVLSC
KSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSN
ALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGAMPGAGAA
MSHLGPHNGTLGSESSQGDMDDNIDCGDDFDDDISSEHMSSAHDLDVGDRPKSSDDFKGL
LFEQKLRIDATGVVNTTPRPRSTASNANSVNSAPTSPSSGAPRHCSTRTSSPARSMSEAS
QGALDLTPRAMPMQQNNSSNSSRSPALTSAAPQAVVGGRKSPTPPVRNSSANSSTARSPT
SAPTQKSHPQLSPAAALTSPLVPPSAVDCLPPVLHHHLQQQHQHLMQQQAVAAAAAHAQA
QAQHHHQQLQQHAVALHAEQLRREHQIKQEQHQAAHQQHMRQQQQQQQQQEAAHASAHSP
HQLSLPPPHLAHHLQQQQQHQQAAAAAAAAAAAAAQQQQPAGSLPPQGPQPPNPLVAARP
PFGMFPNLPLFPPATAQTMCSAMNTIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCH
SALEIHYRSHTKERPFKCTICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSGCK
EGYE
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcatatatcaactgttttgtgtgaaatgcgtagtgatttcaaagataatcat
caagaaacgatcaataaaatgatacaatttggcaccgttaaatatggaatcgtcaaacag
ctgaaagatcgtgcgcgtagcgctgaaaaagatgatacaagcgatcaggaggagaatggt
gcttgctgttcacccattgctagtcaagaagtggctagtaacaatacaacagaccctgct
acaacagcaacaacaacaatgacagctttggatgtgcttgctacgccgttgcacagcgca
attggcaatgatttgtccgttgcggcggcacaagcgcaagattgcacacaaagcgcagcc
gatgtggctgaaaatagcacaacaacagaagccgatacggctgctgccgctgctgctgct
gcgcacgacgttgcgctcaacgaagatcacaatcacaacaacaccagaaacagcaacagc
aatagcaacagcagcgccaatagtgttttgatgtccggtgcatcgccaacgcgactagaa
caagcgcgcggcacaacgcctgtggagcgcttactacagctgaaatcgcttgccgatgcg
gcggtggtagcgaaaacaatggcaggtggcgacagcgcagcgtcagcaattagcgctgcc
ggttcaccagcatacaacacatatccggcagataacgcttgtgttacaaacaacagcaaa
tttgattcacccacacacatggatgcggagaagcaagcgagagcgcagctttatgtggca
gtaggcgctgcgaaaaagcggcgcgcgtcagcgatggaagatgaggacaacaatgggaat
gacaatgaagaagcagatggagatggagcggaagaagcgcaagtaaaaccagctacagaa
agattggcggtgaagcagctaaccagcgaatcgccagctaatttagcgacaccaaagacc
agtggctcggtgagcagcaatgcagtggctgctggcgagtcagatgacaacttagcaaag
cccatttctgcatcactaacgcccacctcaagcgcgctcgccgccgctagcgcattgcca
caagccgctgcagccgctgccgcttttggagctgcgcccgtcaatttggaagccatacag
aatatgcaaatggctatcgcgcaatttgcggccaagacgatagcgaatggcgcgcagggt
ggcgataatgatgcagcgatgaaacaattggcatttttgcagcaagcgcttttcaatttg
caacaacaacaactctttcaaatacaactcattcaacagctgcaatcacagctggccatg
aatcagccgaaggggtcgagcgatggagcagaagctggcgactgtgaggaaatggaagag
gaacgcgaagatggcgaggaggatacgtatgaggaggaagagcgcattgccgagatggaa
ttgcgtcagaaggcggaggcgcgcatggctgaagcaaaggcgcggcagcatcttattaat
gctggtgtgccgctgcttgatgaaaacgccggcggtacgacaaagccaagtacctcaggc
ggagcgagcggttcctccggcgcggcagagtcactcaagcgcaagcgcgaggatgatgag
gatgcggacgcctttagcgttgctaccagacgcatgagcgtagaggtgacgacgcgtgca
agcgcagaaggcgcgcgtttgagcgaacaaataccaacatcatcggatgcgctgagcaaa
ctgaaagcgctcgagaatatgccgctgccctacggttcggatttggcgtcgaccattatt
accaatcacgatgatctgcccgagcccaactcgctggagatgttgcagaagcgcgcgcaa
gaggtgctggattccgcctcgcaaggtatactcgcgaacaatatggccgatgagtttgcg
tttcgtgataaaaatggcgatggcaagaatcgaaatgagccattctttaagcatcgttgc
cgctactgcggcaaagtgttcggctctgattcggcgctacaaatacacatacgttcccac
actggcgagcgtccattcaagtgcaacgtctgcggcagccgcttcaccaccaaaggtaat
ctgaaagtgcactttcagcgacacgcacataagttcccgcatgtaccgatgaatgccacg
cccatacccgagcacttggacaagttccacccaccgttgttggatcaaatgtcgccggat
agttcgccgacgcatacgccggcagcgttgccacaacaaatgccccaacagatgccgcca
gtatcgctgccgttaccttttccgccaggcgctgcctttcccggacttcccggtctgtat
cggccgccaatggagctgctgaagtcgttgggcaacgcgggtttcccaaatccattcttt
ccgcatatgccgccagttgggcagtcacgcgcggaaacgccagcgactcggcatgcatcc
aaggagagtaatcaggatatgccaactgatttgcgtaagtcctcggcatctaattcaccc
ggactgccagtcaagactgaaatcacagaagaggagaaaaaagaagttcgagcggaggcg
caaaaagctaccaagtcacggccgtcggaaagtgcaaatgttgccacaccgcaggacgca
gcgccggccttggacataaaaatcaaagaggaacgaatcgatacggattcgcaagacgaa
gagatggaacgcgcagacacaccacctgcacagcgtgcgacgacacctgcacgtacctcc
ttatcaccatctcaaagatgcgccagtgcgcccttcacacctccaacacccacatccagg
ccattgacgatgccacctgttgtacagccagcgcaaccacccatgtctaggcatccgcat
ccctcgccgggcgcccacaaccatattgatcacctgcccacacccggtcagctgccgcca
tctttgcatcaccgcgatgacttctttgccgaacgctttccactgaattttaccaaaaat
ctttcgcccgaacaccattcgcccatacgctcacccgcgcacctacaacgctcgccattc
ttcaaccccatcaaccacgagatggcgctgctaccacgcccccacagcaatgacaattcg
tgggagaacttcatcgaggtttcgaacacctcggagacgctgaaactgaaggagttgatg
aagaacaagaagctcagcgacccaaaccagtgcgtcgtatgcgatcgtgtgttgtcatgc
aagagcgcgcttcagatgcactaccgcacgcacactggcgaacgcccattcaagtgccgc
atttgcggacgcgctttcaccaccaaaggtaatctgaaaacccacatggcagtgcacaag
atccggccacccatgcgcaatttccaccaatgtcccgtctgccacaaaaagtactcgaat
gcgctggtcctacagcagcatatacggctgcataccggcgagccgactgatctcacaccc
gagcaaatacaagcagccgagatacgtgatccaccaccgtcaatgatgccgggcgccttc
atgaatcccttcgcagccgcggctttccacttcggcgccatgccaggcgctggcgccgcc
atgagtcacctgggcccacacaatggcacactcggctcggagtcatcgcagggcgacatg
gatgataacatcgactgcggcgatgacttcgacgatgatatatcctcagagcacatgtcc
agcgcgcacgacttggacgtcggcgatcgaccgaaatccagcgatgacttcaaaggcttg
ctcttcgaacaaaagctgcgcatcgatgccaccggtgtcgtgaacaccacaccgcgtccg
cgttcgactgccagcaatgccaactcggtaaactcggcgccaaccagccccagctcgggc
gcgccgcgtcactgctccacacgcaccagctcgcctgcgcgctccatgtccgaagcatca
caaggtgctctagatctaacgccacgcgccatgcccatgcaacaaaacaacagcagcaac
agctcacgttcgccagcgctgacgtctgcagctcctcaagctgtggtggggggtcgcaaa
tcgcccacgccaccggtgcgcaacagcagcgccaatagcagcacagcacgaagccccaca
tcggcgccgactcaaaagtcgcacccacaactgagtcccgcagcggcgcttacctcaccg
ctggtacccccatcggctgtcgactgcctgccgccggtgctgcatcaccatctgcagcag
caacaccagcatctaatgcaacagcaagcggtagcagcagcggcggcgcatgcgcaagct
caagcgcagcaccatcatcaacagttgcagcagcatgccgtcgctttgcatgccgaacag
ctaaggcgcgaacaccaaatcaagcaagagcagcatcaggcggcgcatcagcaacatatg
cgccaacaacaacaacagcagcagcaacaggaagcggcgcatgcgtcggcacattcaccg
catcagctttcgttgccgccaccacacttggcgcatcatctgcaacaacagcagcagcat
caacaggcggcggcggcggcggcggcggcagcagcagcggcggcgcaacaacaacagccc
gcaggctcgctaccaccacagggaccacagccacccaatccattggttgcagcgcgtccg
cccttcggcatgtttcccaacctgccgctcttcccgccggccacagcgcaaacgatgtgc
tcggcaatgaatacgattgcgcagtcggtaatgccggcggcaccgttcaatccacttgca
ctttccggcgtgcgagggagcaccacctgcggcatctgtttcaaaacattcccctgtcat
tcagctttagaaattcattatcgcagtcacactaaggagcgaccattcaagtgtacaatc
tgtgatcgcggttttactacaaagggtaacctcaaacagcatatgctgacacataaaata
cgggatatggagcaggaaacatttcggaatcgtgctgtaaagtatatgagtggctgcaaa
gaaggctatgagtag
DBGET
integrated database retrieval system
