Rhagoletis zephyria (snowberry fruit fly): 108377935
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Entry
108377935 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC108377935
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108377935
Membrane trafficking [BR:
rze04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
108377935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_N
HPS3_C
Motif
Other DBs
NCBI-GeneID:
108377935
NCBI-ProteinID:
XP_017489723
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MVKILQAYNFAKQHTYSLNGDILSASLIDSSRIAVSSAEQFIEIYDIGGKQRRNELNGID
LNAITTASEYAAAEAAAAAAAAQAAADERLPTKYTLATVGEVVHLIYCEAGKYLLTLEKE
TLSSPVQTGTTGMSCTSSSSTTTICPEEDTKMFVRIYANFWKFPDAKLIDLPITIRIASM
TTPKAPLVESIDVIELPLRSPPDLIQCCQTSGNIIVSSKERIYLYEYTQCIHETTQPRFS
YIDFLPFKFFVNLNFLPLRLCLAENVIAAMNNRYCVAFKVVDVVGSSAAGGAHCSPMDND
YGGGSGGGRGDGGGLDDVADVDLDEAISSTESSLMSKVSGGPSSHNSFETDSLETTSSGR
PLGVAGFPGRTPIDFNVARIVNSACGREFEVDLKSQWELGDAISVGGGLAPTLIGSSGVG
GGCGGDTQEIIIMPARANDIKIKLVNEAKAMNLQRVSSHGNMAYVYNEDTSVQYDVRKLL
QICMKSSEPNGRIVDILRCMDLKAIYQRNPNEEGLEDSEYDMGNQQVPGAVTTTKHANRR
TLKSGHHQSCVGYALLVASSVDGYLYQFCAQGKWYSENEKPIAVYSFTAPVLRVHINDYV
IYAITTESVETHTSRIGHKLYHNRFEYPTLGGLFPEESSPDVNSAIAVIGLCAFMHVQYV
CVNHNNLVLITNSALANNNNEASKRRSGGAPAGSAGGRNIAARILAEAKVKNLLRSSSNN
AAQPPLLNEWTLYNLDLPPVEHVIEDLEAIAESYRAASSSNFYDLMEEAHVMLRLSLSLQ
CEQLTEEREQQLRSKFVENCRKLADFSIRSRKKEVYLQATGFYKMCNLQLTDIYSNYINC
YVQPACVEQQQLPFGNCSDSPLTDETQLVGLIYTVKMFLLGLGTDRLLAAFLNQLVKPFF
TPNRVIEQGYPQVPLSLEFLNMFIKYSPSDIPQIMLNSPVVADAISGELVNYLKYLDKLN
PDENLLLAVTACRMSNYLLAQEVVTRLSRRELTVALMKHKNVLFDDGTVLFQRRGSHHHD
TLKFRNGSSGPGAQLHKSAAAQIMRRQQKRKPSFGQAHSASPLLAPTHTGHGVISFSDFT
ETILLAAENADLIEAISDVFIHALCIEHSITLETILQLFLNYIASHIGHKGYQTSQKVFV
NILQVYYYDYFDVNPMRNPHDIPTHTPPHMEGVDEYDETSSKAPSLNSERDNESIANSLP
ESNSGASSSIDDRSYSHPINRNRIVYDQLHDPSSHYKRNITHSPIQLDTNEPQTPTQGNS
DAETNLKGLKILFRMYMGRLKALSDLITDLQSADVEQQPPVNEDFVSLRMECIKFMIRHL
QELRAQQQQQQQQQQNTLLRNSAYTQYYYAKSASSSVAQPPVAAEERKIIYVPFIPDYKL
SGEEFERHMKSYLRPIPCLLDRPQYLNRLPPFRRDDFSYPNRDEGECEVHFLGWHNELLT
LTLKIQSLLASTKIDREIIEEFIAFIQKTPDLIGIDSFLVIVLPKHLAINYMLNFCPEYM
WQYGKDNRVTPKHPVCIRKVIAXICNSLLKKILSKQNLVPNWKAHITEILNNLVAELSFE
ELLQCFPSEAIKHHKTEAFLKEFKDNRINYVNDKLTFEDKAQQNTLDNETMLARDHLPMD
NIDENNVFELTLRKAVSKQRSIALRSMIESTGTQLFDATSNPMYNL
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaattctgcaagcctataactttgccaagcagcacacttactctctaaatggt
gacatactctccgcctcgctgatcgactccagtcgcattgctgtgagcagcgctgagcaa
tttattgagatctatgatatcggcggcaagcagcgacgcaacgaattgaatggcatcgat
ttgaatgccattaccacggcaagtgagtatgccgcagctgaggcagcagcagccgcggcc
gcagcacaagctgccgcagatgagcgactgcccacgaaatatacgctcgcaacggtgggt
gaagtggtgcacttgatttactgtgaagcaggcaaatatctactcacattggagaaggaa
acgctcagcagtccagtacaaactggtaccacaggcatgagctgtacgagcagcagcagt
actaccaccatctgtccggaagaagacactaaaatgttcgtgcgtatctatgcaaacttt
tggaaattccccgatgcaaaacttatcgacctccctataactatacgcatcgcgtccatg
accacacccaaggctccactagtcgagagcatcgatgtcattgagctgcctttgcgtagc
ccacccgatctcatacaatgctgccagacgtcgggcaacattattgtgagcagcaaggag
cgcatctatctatacgagtatacccagtgcatacacgaaactacacagccacgtttctcc
tacatcgactttctaccttttaaattttttgtaaatctaaattttctaccgttgcgcttg
tgcctcgccgaaaatgttatcgcagcaatgaataatcgctactgtgtcgctttcaaggtg
gtcgacgtggttggcagcagcgcagccggtggcgcacattgtagccccatggataatgat
tacggcggcggcagtggtggcggtcgtggtgatggtggtggattagacgatgtggccgat
gtggatttggatgaggccatctcgagtacggaatcgagtctaatgagtaaagtgagcggc
gggccctcgagtcataacagctttgaaacagattcgttggagacgacctcaagtggacga
ccgttgggcgtggctggttttcctggacgcacgccaatcgatttcaatgtggcgcgcatt
gtgaactccgcctgtggacgcgaattcgaagtggatttgaaatcgcaatgggagttgggc
gatgccattagtgtcggtggtggcctggcgccgacattgattggtagtagcggcgttggt
ggcggttgtgggggagatacacaggagattataattatgccagcacgcgcgaatgacatc
aaaattaagctggtcaatgaagcgaaagctatgaatttacaacgcgtctccagtcatggc
aacatggcgtacgtttacaacgaggacactagcgtacaatatgatgtacgcaagctgttg
cagatttgcatgaaatcttcggagcccaacgggcgcattgtagatattttacgttgcatg
gatttgaaagcgatttatcagcgcaatccaaatgaggagggattggaggactctgaatat
gatatgggcaatcaacaggtgccaggtgctgtaaccacgaccaagcacgccaatcgacgc
acgctcaaatctggacatcatcaaagttgcgtcggttatgctttattggtggcaagcagc
gtggatggctatctgtatcagttttgtgcgcaaggcaaatggtacagcgagaacgagaag
cccattgccgtctactcgttcaccgctcctgtgctgagggtgcatatcaacgattatgtc
atttacgccattaccacagagtcagtggaaactcacacgtcacgcattggccacaaactc
taccacaaccgctttgaatatcccacactgggcggacttttccccgaggagtcgagtccg
gatgtgaactcggccattgcggtcatcggcctctgcgccttcatgcacgttcaatatgtg
tgtgtgaatcacaataatttggttctaatcaccaatagcgcactggccaacaacaacaac
gaggcgagcaaaagacgcagtggtggcgcgcccgctggcagcgctggcggacgcaatata
gctgcgcgcatactcgccgaggctaaggtaaagaatttgttacgcagcagcagcaacaat
gctgcacaaccaccgttactcaatgaatggacgctttacaatttggatttgccgccggtg
gagcatgtcattgaggacttggaggccattgctgagtcatatcgagcggctagcagctca
aatttttacgatttgatggaggaggcgcatgtcatgttgcggctgagtctgtcgctgcag
tgtgagcaattgaccgaggagcgtgagcaacagctgcgcagcaaattcgttgagaattgc
cgaaagttggcggacttttcgatacgttcacgcaagaaggaagtttacctgcaggccact
ggcttctataaaatgtgcaatctacaattgacggacatctacagcaactatatcaactgc
tatgtgcaacccgcatgcgtcgagcagcagcagctgccgtttgggaattgcagcgattca
ccgttgactgatgagacgcagctagttgggctaatttacaccgtgaaaatgttcctgcta
ggtttgggcaccgatcgcctgctagccgcctttttaaatcaactggtgaagccatttttc
acacctaatcgtgtcatcgaacagggctacccgcaagtgcctttgtcgctggagtttcta
aatatgtttatcaaatattcgcctagcgatataccacaaataatgttgaattcgccagtg
gtggcagatgcgatcagcggcgagttggtcaactaccttaaatatttggataaactcaat
cctgatgagaatcttttactcgccgtaacagcctgtcgcatgtccaactatttgctcgca
caggaagtggtaactcgtctgagtcgccgcgaattgacggttgctctgatgaaacacaag
aacgtactcttcgacgatggcactgtactattccagcgacgcggatctcatcatcatgat
acgcttaaatttcgcaacggttccagtgggccaggcgcacaactccacaaatcggccgct
gcgcaaataatgcgccgtcaacaaaaacgtaaaccttcatttggtcaagcgcacagtgcg
agccccttgcttgcgcccacacacactgggcatggcgttatatcgttttcggattttact
gaaaccattttgttggccgcagagaatgcggatctgattgaggccatcagcgatgttttc
atacatgccttatgcatagaacatagcattacgttggagactattttacagctttttctc
aactatatcgcctcgcatatcggtcataaggggtaccagacgtcgcagaaggtgtttgtt
aatatactgcaagtctactactacgactatttcgatgtgaatccaatgcgaaatccgcac
gatatacctacgcatacgccgcctcacatggagggcgttgatgaatacgatgaaacctcc
tcaaaggcgccctctctaaacagtgaacgcgacaacgaatcaattgccaactcactaccc
gaatcgaattccggcgcaagctcgtcaatagacgatcgcagttattcgcatcccataaat
cgtaatcgcatcgtctacgatcagctgcatgatccaagctcgcactataagcgtaatatc
acacactcaccaatacaattagacacaaatgaaccacagacgcccacgcaaggtaacagc
gatgctgaaacgaatctaaaaggcctgaaaatactctttcgcatgtatatgggtcgccta
aaggcgttgagtgatcttataactgatctgcaatcggccgatgtcgaacaacagccacca
gtgaatgaggatttcgtgagcctgcgcatggaatgcataaaatttatgatacgccattta
caggaattgcgcgcacaacaacagcagcaacagcagcagcaacagaatactttgctgcgc
aacagtgcatatactcagtattattatgcgaaatcggcaagtagcagcgttgcgcaaccg
ccggtcgcagcagaagagcgtaaaatcatctatgtgccctttataccggattataaattg
agtggcgaggagtttgagcggcacatgaagtcatatttgcgaccgattccatgtttgcta
gatcgtccgcagtaccttaatcgtttgccgccatttcgacgcgatgacttcagttatccc
aatcgcgatgagggtgagtgtgaggtgcacttcttgggctggcataatgagctgctaacg
ctgacgttgaaaatacagtcgctcctggcatcaacaaaaatcgatcgtgaaatcattgag
gagtttatcgcattcatacagaagacaccggatttgattggcatcgatagcttcctggtg
attgttttaccaaaacatttagccatcaattatatgctaaatttctgtcccgaatatatg
tggcaatatggcaaggataaccgtgtaactccaaaacatccggtctgcattcgaaaagtt
attgcatagatatgtaattcgctgttgaagaaaatcttaagcaaacaaaatttggtgccc
aattggaaggcacatatcaccgaaatactcaacaatctagtggccgagctatcattcgaa
gaactactgcaatgctttcccagtgaagctatcaaacatcataaaaccgaagcattttta
aaagaattcaaagataatcgcatcaactacgtcaacgacaagctgacgttcgaagacaag
gcacaacaaaatacgctagacaacgaaacaatgctggcacgcgatcatcttccaatggac
aacattgatgagaataatgtttttgaactgacattgcgtaaagctgtttcgaaacagcgt
agtattgcgttgcgttcaatgatcgagtcgacgggtacgcaactattcgatgctactagt
aatcctatgtataatctatga
DBGET
integrated database retrieval system
