KEGG   Rhagoletis zephyria (snowberry fruit fly): 108377957
Entry
108377957         CDS       T08513                                 
Name
(RefSeq) cyclin-H-like
  KO
K06634  cyclin H
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022  Basal transcription factors
rze03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108377957
  09124 Replication and repair
   03420 Nucleotide excision repair
    108377957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rze03021]
    108377957
   03400 DNA repair and recombination proteins [BR:rze03400]
    108377957
Transcription machinery [BR:rze03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     108377957
DNA repair and recombination proteins [BR:rze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     108377957
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB Cyclin_C CycT2-like_C
Other DBs
NCBI-GeneID: 108377957
NCBI-ProteinID: XP_017489747
LinkDB
Position
Unknown
AA seq 286 aa
MFPLSSQKKFWTFSTEQQLNELRLQQNVNYIKAHGVEMDREQRDSHFLSPSEERILLKQY
ELYLNDFCRRFEPPMPKCVVGTAFHYFKRFYLNNTPMDYHPKEILATCVYLACKVEEFNV
SIGQFVGNIKGDRNKAMDIILSNELLMMQQLNYYLTVHNPYRPVEGFLIDIKTRSNMPNP
ERLRPHIDEFIEKTFFTDACLLYAPSQIALAAVLHAASKEQENLDSYVTENLFVAARDKL
PVLIEAVRKIRFMVKTYELPAKDKVKIIEKKLEKCRNQDNNPDSQM
NT seq 861 nt   +upstreamnt  +downstreamnt
atgtttcctttgagctcgcagaagaaattctggactttttcaactgaacaacaacttaat
gaattacgtttgcaacaaaatgttaattacattaaggcacatggcgtggagatggatcgg
gaacaacgtgactcccacttcctctcgccaagtgaagaacgtattctactaaagcaatat
gagctctatttaaatgacttttgtcgccggttcgagccacctatgcccaaatgtgttgtt
ggcactgcatttcattatttcaaacgtttctatctgaacaacacaccaatggattatcat
ccaaaggagatactcgccacgtgtgtttatttggcttgtaaggtcgaggaattcaatgta
tcaattggccagttcgtgggcaatataaaaggtgatcgcaataaagcaatggatattata
ctctcaaatgagttgttaatgatgcaacaacttaattactatctaacagtacacaatcca
tataggccagttgaaggtttcctcatagacattaagactcgaagcaatatgccaaatccc
gaacgcttgagaccacatatagatgaatttatagaaaaaacattctttaccgatgcctgc
ctgctatacgcgccatctcagattgctttggcagctgtgctgcatgccgctagtaaagag
caggaaaatttggatagctatgtaacagagaatttatttgtagcggcgcgggataaattg
ccagttctgattgaagctgtgcgcaaaatacgttttatggtaaagacttacgagctgccg
gcgaaggacaaagtaaaaattatcgaaaagaaattggaaaaatgtcggaatcaggacaat
aatcccgacagtcaaatgtaa

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