Rhagoletis zephyria (snowberry fruit fly): 108378117
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Entry
108378117 CDS
T08513
Name
(RefSeq) protein slit-like
KO
K06839
slit 2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108378117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rze00536
]
108378117
Glycosaminoglycan binding proteins [BR:
rze00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108378117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_1
Laminin_G_2
hEGF
LRRNT
LRR_9
EGF_TEN
LRRCT
LRR_14
LRR_NXF1-5
LRR_LRWD1
EGF_Teneurin
EGF_3
EGF_PEAR1L
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
108378117
NCBI-ProteinID:
XP_017489905
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MALTGQTMYGLKSLKMLHLDNNELTCIEDDVFDSLKELEILSLNQNNLTSIGSYTLESLT
KLKSLRLSENPLACDCSLSWLAQYLRTHTRLARSTKCGSPFYLSGKLVAELSKRDFKCNT
GWLRLSAYLKSTNSPLDAGDILYDTFLQNDSPSRVCSIKPQCPFACQCQDGVVDCRNRNL
TKIPDFIPENATELSLYDNNIQSLAEGIFDNMINIQTLSLYDNNIQSLAEGIFDNMINIQ
TLHLGRNPFICDCNLRWLAEYLRDRPTLETSDARCEEPKRNNRKRFAQLHPDKFRCKGAE
ELRTRHADQCMVDNKCPKQCVCDGTIVDCSRQGLHSLPDDVPTFATELRLNDNRIARIPN
AEYFKRLSNLLKLDLRNNEIAEIEDGALQGADMLQDLLLSNNQMKQIRPKMFAGLRNLTT
LLLQENQITCITNDTFSDLEALKILSINDNRIRCITSGAFEKTKHLAQLNLLSNPLNCNC
HLRWMSNWLKQHTVMVGNPRCQSPKALQNVPIDDVEANDFKCDDLEEEAECGPDGLCPAR
CTCIGTVVRCSRQKLKKFPRFIPSTTTELYLDVNEISAIPNELTLLPQLTKLDLSNNKIA
ILPAHVFRNLTNLQSLILSYNKLQCIKTDAFKGLESLKMLSLHGNDISVIPTGSFDNLKI
THLAIGANPFYCDCHMRWMAEWIQKTYSEIGIARCTEPKSMSDKLLISAPPNHFICPNAS
EARILAKCNVCYTFPCKNGATCVEKPMLDYKCECAPGFHGQHCENKIDACFGNPCDNGGI
CKILEHGRFSCHCPIGYKGDRCEINVDDCEVNKCENNSTCVDGIGSYKCECLPGTYGDYC
EKKIQFCSKEFNPCKNGQCVEVGDGYECSCTAGWTGANCTVNKDDCAINMCQNGGTCVDE
VNGYRCECSLGYDGQFCEKLPEVDMLYPQTSPCQHHDCKHGVCFLPPGSSDYVCKCSPGY
TGKRCDVLSSINFKNGSFLEFEPLKTKPSLNITLKFVTKKQNGVLLYFGEEQHLAVELFK
GRIRISLDVGNYPVSTMFSYETVSDGTYHQVQFQLVRKNFTMKVDGGVPRTIINEGVREY
LEIQNSSLYVGGVPDEVAHSAVRNWHIWNSTSLEGCMREFFINGNPPDLGMARSQNQVNP
GCVDFDEVNHACMNHMCQNGKCVPSRDGQSYDCKCKVGFSGPFCDQAPTCQKEIKRDFYY
EKACRSTKKLKLASCVGSCGDGCCRAQKTKKRSIKLACSDGSKYTKQIEVVRKCGCSRKC
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggctctcactggtcaaacgatgtacggattgaagtctctaaagatgctccatttggat
aacaatgagttgacctgcattgaggatgacgtttttgacagtttgaaagaactggaaatt
ctatcgttgaatcagaacaacctcacttcaattggctcgtacactcttgaaagtttgaca
aaacttaagtctcttcgtttgtcagagaatcctttggcctgcgactgcagtctttcctgg
ttggcacagtatctgcggacgcacaccagactggctcgttccacaaagtgtggttcgcct
ttttacctctctggaaaactggtggctgagttgtctaagcgcgatttcaagtgtaacaca
ggttggttgagactatctgcgtatttaaaaagcactaactcaccacttgatgcaggtgac
attctctacgacaccttccttcagaatgatagcccctctcgggtttgctctatcaagccg
cagtgtccatttgcctgtcagtgccaggacggcgttgtcgactgtcgcaatcgaaacctc
accaagattcctgactttatccccgaaaatgccactgaactatccctgtacgacaacaac
atccaatcactggccgaaggtatttttgacaatatgatcaatattcaaacactatccctg
tacgacaacaacatccaatcactggccgaaggtattttcgacaatatgatcaatattcaa
acactgcatctgggacggaatccattcatctgcgactgcaacctacgctggctggcggag
tacctgcgcgatcggcccaccctggaaacatctgacgcccggtgtgaggaaccaaaacgg
aacaatcgaaagcgattcgcccagctgcacccggacaagttcaggtgtaagggggcggag
gagttgcgcactcgacacgccgatcagtgcatggtcgacaataagtgccctaagcagtgc
gtctgcgacggaaccatcgtcgactgctctcgccagggactgcactcgctgcccgacgac
gtgcccacctttgccaccgaactgcgtctcaacgacaaccgcattgctcgaattcccaac
gcagagtacttcaagcgactgtccaatttgcttaaacttgatctgcgcaataatgaaatt
gccgaaattgaagatggcgcccttcaaggagcagacatgctgcaggatctactgctgagt
aacaaccagatgaaacagattagaccgaaaatgtttgccggcttgcgcaacctcaccacc
ttgcttttacaagagaaccaaatcacttgcatcaccaatgacactttttccgatttagaa
gctctgaaaatcttatcaatcaatgacaaccgaattcggtgcatcacttctggtgctttt
gagaagaccaaacatctcgcccagctgaacttgctttccaatcctctcaactgcaactgc
catttgcgttggatgtcgaactggctgaagcagcacaccgttatggttggaaatccccgc
tgtcagtcgcccaaagcactgcagaatgtgcccattgatgacgtggaggcaaatgacttc
aaatgtgacgacttggaagaggaggcggaatgtggccctgacggcctctgcccagctcga
tgcacgtgcattggcacagtggttcgctgttcgaggcagaagctgaaaaagttccctcgt
ttcattccaagcaccaccactgaactgtacctggacgtcaatgagatatcagccattccc
aatgagctgacccttttgccgcagttgacgaaactcgacttgagcaacaacaaaattgcc
atccttccggctcacgtttttcgaaatttgacaaacttgcaatcgctgattcttagctac
aacaaacttcagtgcatcaaaactgacgctttcaaaggattggagtcactgaaaatgctg
tctttgcacggaaatgacatctcggtaattccaactggctcgtttgacaatctcaaaatc
acccacctcgctattggagcgaatcctttttactgtgactgccacatgcgatggatggct
gagtggattcagaagacatactcagaaattggaatcgctcgttgcacagagcctaagtcg
atgagtgacaagttgctcatttcagcaccgcccaaccacttcatttgcccgaatgcttct
gaggcgagaatcttggccaaatgcaatgtgtgctacacctttccctgcaaaaacggcgcc
acctgcgttgaaaagccaatgctcgactacaaatgcgaatgtgctcctggttttcatgga
cagcactgcgagaacaagattgacgcctgctttggcaatccttgcgacaatggcggaatc
tgcaaaatactagagcacggtcgttttagttgccactgtccaattggctacaaaggcgat
cggtgtgaaattaacgtagatgactgtgaagtcaacaaatgcgaaaacaactccacatgt
gtggacggcattggctcgtacaaatgcgagtgcctgcctggcacctacggcgactactgc
gagaaaaagattcagttctgctcaaaggagttcaacccgtgcaagaatggacagtgcgtt
gaagtgggcgacggatacgagtgcagctgcactgctggctggacgggcgccaactgtacg
gtgaacaaggacgactgtgccatcaacatgtgccagaatggaggcacctgtgtggatgag
gtcaatgggtaccggtgtgagtgctccctcggctacgatggccagttctgtgagaagctg
cccgaagtggacatgctctatccgcagaccagcccgtgtcagcatcacgactgcaaacac
ggtgtctgttttctgcctcccggctcctcggactacgtctgcaagtgctccccgggctat
actggaaagcggtgtgacgtcctctcgtcgatcaactttaagaacggctccttccttgag
tttgaaccactgaagacgaagccgtcgctgaacattacgctaaagtttgtcacaaagaag
cagaatggagtgctgctgtactttggcgaggagcagcacctcgcagtggagctgttcaag
gggcgaattcgcatcagtcttgacgtcggcaactacccagtgtcgacgatgttctcctac
gagacggtcagcgacggcacatatcaccaggttcagtttcagttagtcaggaagaacttt
accatgaaggtcgacgggggcgttccgcgcactattatcaacgagggcgttcgtgagtac
cttgaaattcaaaacagctcgctctacgtgggcggagtgcccgatgaggtggctcattcg
gcagtgcgcaactggcacatctggaactccactagtcttgagggttgcatgcgagagttc
tttattaacgggaacccacctgatttgggcatggcccgaagtcaaaaccaagtgaaccct
ggctgtgtagactttgacgaggtgaaccacgcttgcatgaatcacatgtgccaaaatggc
aagtgcgttccgtcgagggacggccagagttacgactgcaaatgcaaagtgggcttcagt
ggaccattttgcgatcaagcaccaacatgccaaaaggagataaagcgcgatttttactac
gaaaaggcatgcagatcaacaaagaagctgaagctggcctcctgtgtcggctcttgtggc
gatgggtgctgtagggcgcagaagaccaaaaaacggtctatcaagttggcctgcagtgac
ggctccaagtacaccaaacagatcgaggtggttcgcaagtgtgggtgcagtcgcaaatgt
taa
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