Rhagoletis zephyria (snowberry fruit fly): 108378834
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Entry
108378834 CDS
T08513
Name
(RefSeq) integrin beta-PS-like
KO
K05719
integrin beta 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04145
Phagosome
rze04512
ECM-receptor interaction
rze04820
Cytoskeleton in muscle cells
rze05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
108378834
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108378834
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108378834
09142 Cell motility
04820 Cytoskeleton in muscle cells
108378834
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108378834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108378834
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rze04147
]
108378834
04515 Cell adhesion molecules [BR:
rze04515
]
108378834
04090 CD molecules [BR:
rze04090
]
108378834
Membrane trafficking [BR:
rze04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
108378834
Exosome [BR:
rze04147
]
Exosomal proteins
Proteins found in most exosomes
108378834
Cell adhesion molecules [BR:
rze04515
]
Integrins
Integrin beta subunits
108378834
CD molecules [BR:
rze04090
]
Proteins
108378834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_2
I-EGF_1
EGF_Teneurin
Collectrin
ApoC-I
Motif
Other DBs
NCBI-GeneID:
108378834
NCBI-ProteinID:
XP_017490633
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MHHNWLCRRILFGLKAFFLGAFILGQVSGPISTEFVKQSTTTYFGGFDEFSSPFAELALE
ASQCITKEDCGECIRASPTCAWCSAPGNMTSRCDTVFNLQQRGCPSPSLHSPTSNMNLDQ
DEELSNKTREYEDPVQLRPQRISVNLRPKHPVPVKVTFRQALDYPVDLYYLMDLSKSMED
DKAKLAELGNILAEKMKKLTSNFRLGFGSFVDKVVMPYVSTVPEKLREPCTGCAAPYGFK
NHMKLDTDSNEFVRKVADTQISGNLDAPEGGFDAIMQAIVCKNDIGWREKSRKLLVFSTD
AGFHYAGDGKLGGIVKPNDGHCHLDKDGVYTESISQDYPSISQINRKVQEHHVNIIFAVT
EGQFHIYNQLTGDSNNSLSLIEGSSAGKLESDSSNVVQLIEDEYKKITSAIELKDNATSD
VSITYTSSCLGNRKEQTNVCKDLRVGDEVVFDLKIQLESCPSNRNEWNQTIKIYPIGLKD
ALYIDLYMICDCECERDWNSIESSPGCNFKGTEQCGICKCNPGFEGERCECDSKDLDKVE
MIDRCRKGNDTKLCSGRGTCRCGVCECYPRDAPEKVSGQFCECDNFSCDRYDGKVCAGPE
HGTCECGNCICNDGWSGPDCSCKVSQDDCVNPKTNKICSGHGKCSCGQCVCDAKENEQYT
GQYCDQCPTCKNLCDVYKDCVQCRIHKSGPLTKEECANCTINPIGTTEFEVLEGEELCVI
WDENDCIFNFKYKYDETEDAIFVIAQNTKDCPQPVDVLAIVIGVIVGIVIIGIALLLIWK
LLTTIQDRREVAKFNEERMNAKWETGVNPIFKKATTTFKNPTYSGK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaattggttgtgtcgaaggatacttttcggactgaaagcattctttcttggc
gcctttatccttggccaagtcagcgggccaatcagcactgaatttgtgaagcagtcaacg
accacctatttcggtggcttcgatgagttcagctcgccatttgccgagctggcactggag
gctagccaatgcatcaccaaggaggactgtggcgagtgcatcagagccagtcccacctgt
gcctggtgttcagcacctggtaacatgacatctcgctgtgacaccgtcttcaatctccaa
caacgaggatgtccctcaccgagccttcactcgcccacctccaatatgaacttggatcag
gacgaagagctgtcgaataagaccagagagtatgaagaccccgtccagttgagacctcaa
cgaatttcagtcaacttgcgacctaagcatccagtgcccgttaaggttaccttcagacag
gctcttgattacccagtggatctgtactacctgatggacttgtccaaatcaatggaggac
gataaagcaaaactggctgaacttggaaacattttggcggagaaaatgaagaagctgacc
agcaactttcgcctgggatttggctcttttgttgacaaggttgtcatgccctacgtgagc
acagtgccagaaaagttgcgagaaccctgcaccggatgtgctgctccgtatggttttaaa
aaccacatgaagctggacaccgattcgaatgagtttgttcgcaaggttgctgacactcaa
atttcgggcaatttagatgcccctgagggtggttttgatgcaatcatgcaagctattgtt
tgcaagaatgatattggatggagagaaaagtcacgaaagttgcttgttttctccactgat
gctggctttcactacgcaggcgatggaaaattgggtggcattgttaagcccaatgatggt
cactgccatcttgataaagacggcgtctacacagaaagcatttcgcaagattacccttca
atcagtcaaatcaaccgaaaagttcaggaacaccatgtgaacataatctttgccgtcacg
gaaggacagtttcacatttacaaccaactgactggtgactcgaacaacagcctgtctttg
attgagggctcctctgctggcaaactagaaagtgactcttctaacgttgtacaactgatt
gaagacgagtacaaaaagatcacctctgccattgagctgaaggataacgccaccagtgat
gtcagtatcacctacacctcgtcttgtcttggaaatcgaaaggaacaaactaatgtttgc
aaagaccttcgcgttggcgacgaggtcgtctttgacttgaagattcaactggaatcttgt
ccgtctaatcgcaacgaatggaaccagactatcaaaatctacccgatcggccttaaggac
gccctgtacatcgatctgtacatgatctgcgattgcgaatgcgagcgtgactggaacagc
attgaaagtagccctggttgtaattttaagggcactgaacaatgtggcatttgcaaatgc
aaccctggttttgaaggcgaacgatgcgaatgcgacagcaaagatcttgacaaagtggaa
atgatcgatcggtgtcgcaaaggcaacgacactaagctctgttcgggtcgcggtacttgc
cgatgcggcgtctgtgagtgctaccctcgagatgcacccgaaaaggtcagcggacagttc
tgtgagtgcgacaactttagctgcgaccgatatgatggaaaagtgtgcgctggccctgag
cacggaacctgcgagtgcggcaactgtatctgcaacgacggctggagtggacctgactgc
agctgtaaggtcagtcaggatgactgtgtcaatccaaagacgaacaaaatctgctcgggc
cacggcaagtgcagctgcggtcagtgtgtttgcgatgcaaaggagaacgagcagtacact
ggacagtactgtgaccagtgtcctacctgtaagaacctgtgcgacgtttacaaggactgc
gttcagtgccgcattcacaagtcgggcccactgaccaaagaggagtgcgccaactgcacc
attaatcccattggcaccacagagtttgaagtgctggagggcgaagagttgtgcgtcatc
tgggacgagaatgactgcatctttaacttcaagtacaagtacgatgaaaccgaagatgcc
atctttgtgatcgcccagaacaccaaagactgtccacagcctgtagacgtgctggccatc
gtcatcggtgttatcgttggcatcgtaatcatcggcattgctttgctgctcatctggaag
ctacttacgactattcaggacagacgagaggtggccaagtttaatgaagaacgaatgaac
gccaaatgggaaacgggagtgaatccaatctttaagaaggccaccaccacattcaagaac
ccgacgtacagcggaaaatag
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