KEGG   Rhagoletis zephyria (snowberry fruit fly): 108379006
Entry
108379006         CDS       T08513                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108379006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rze03019]
    108379006
   03036 Chromosome and associated proteins [BR:rze03036]
    108379006
Messenger RNA biogenesis [BR:rze03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     108379006
Chromosome and associated proteins [BR:rze03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     108379006
    COMPASS/SET1 complex (yeast)
     108379006
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd DSE1_N Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_NOL10_N Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th CFAP251_N Beta-prop_VPS8 WD40_RFWD3 WD_LRWD1 Beta-prop_Vps41 Tricorn_2nd Beta-prop_WDR41 PAC11 Beta-prop_WDR35_TULP_N Beta-prop_SCAP TRM82_WD Arylsulfotran_2
Other DBs
NCBI-GeneID: 108379006
NCBI-ProteinID: XP_017490812
LinkDB
Position
Unknown
AA seq 317 aa
MRLVETVLSSFQVAKTFRENTDRINSIDFSKNGETMISSSDDDSIVIYDCEKGTHKRTLN
SKKYGADLIHYTHAPNTAVHSSNKVDDTIRYLSLHDNKYIRYFHGHTKKVVTLCMSPIDD
SFLSGSLDKTIRLWDLRSPNCQGLMHLVGRPVANFDPEGLIFAVGINSESVKLYDLRSYD
KGPFNTFKLQQDRECDWTGLKFSPDGKIIMIYTNGSVIHTIDAFTGTPLHTLQGHVNNKG
LSLEASFSPDSQFIFSGSTNGNICCWNALTGARTVIFKSDHAAPVQCVQFNPKYMMMASA
CNTMSFWIPALYDETQP
NT seq 954 nt   +upstreamnt  +downstreamnt
atgagacttgtcgagaccgtcctctcttcgtttcaagtggcgaaaacatttcgtgaaaac
accgaccgaatcaattctattgacttttccaagaatggcgaaacaatgatcagctcttcc
gatgatgattcaatagtcatctacgattgtgaaaagggcacccacaagcgtacactgaac
agcaaaaagtatggggccgatctgattcactacacacatgctccaaatactgcagttcac
tcaagtaacaaagtggacgacaccattcgatatctttccttgcacgacaacaaatacatc
cgctacttccatggccacaccaaaaaagtcgtcaccctttgtatgtcaccaattgacgac
tcttttctttctggatctctggataaaacgatcagactctgggatcttcgatcaccgaac
tgtcaaggattgatgcatctggttggccgaccggtggccaactttgatccggaaggactc
atctttgcagttggcatcaacagcgaatcagttaaactttacgatcttcgttcttatgat
aaaggaccgttcaacacctttaaattgcaacaagacagagaatgcgactggaccggtctc
aaattctctcctgatggcaagattatcatgatctacacaaatggatcggtcatacacact
atcgacgcatttactggaacgccactacatactctgcaaggacatgtcaacaacaaaggt
ctttctctggaggcatctttttcgcctgattctcagttcatctttagtggttccacaaac
ggaaatatctgctgctggaatgctttgaccggcgccagaacggttatcttcaagtcagat
catgctgctcccgttcagtgcgtgcaattcaacccaaaatacatgatgatggcatctgcc
tgcaacacaatgtccttctggattccagctctttatgatgagacacagccgtaa

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