Rhagoletis zephyria (snowberry fruit fly): 108379220
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Entry
108379220 CDS
T08513
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
KO
K14961
COMPASS component SWD1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108379220
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
108379220
COMPASS/SET1 complex (yeast)
108379220
MLL-HCF complex
108379220
MLL3/MLL4 complex
108379220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WDR54
Beta-prop_Vps41
Beta-prop_WDR11_1st
Frtz
Beta-prop_LRRK2
Beta-prop_SPT8
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
108379220
NCBI-ProteinID:
XP_017491038
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MNLELLESFGQNYPEEFDGSLDCISLAVTCAFNKYGTLLAVGCNDGRVVVWDFLTRGIAK
IISAHVHPVCSLSWTRNGHKLLSASTDNNVCIWDVLSGDCEHKYRFPSPVLKVQFDPRND
KRFLVCPMRYAAVLVKIGDTHKCLPLDSDGDLNIVASFDRRGKHIYTGNAKGKILVLNAE
TLEIVASFRIIVGSSSATAVKSIEFARRGDAFLINTSDRVIRVYDSKEIIALGKDGEPEP
IQKLQDLVNKTTWKKCCFSGDGEYICAGSARQHALYIWEKSIGNLVKILHGTKGELLLDV
VWHPVRPIIASISSGLVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDITDEDKSV
DLNADAKQDEEIEVDVQKVEPVAAFCSSDEEGEDENALQFLPMAPEVEDPEDGWTMQDGV
EVSLSKENEATSQDYDDATAAKKRKVNNYDISLPDAPVDETHPLISSKTNKDKQPVGGKK
TAGRPKK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagagttattagagtcctttggtcagaattatccagaggaatttgatggctca
ctggactgcatatcgctcgcggtaacttgtgccttcaacaaatatggcactttattggcg
gtcggatgtaatgatggacgcgttgttgtgtgggattttttaacacggggtattgcgaaa
atcatctcggctcacgtgcaccccgtgtgcagtttaagttggacgcgcaatggtcacaaa
ctgctatctgcatctacagacaacaatgtttgcatttgggacgtacttagtggtgattgc
gagcacaaatatcgctttccatcacccgtgttgaaagttcaattcgatcctcgcaatgac
aaacgttttcttgtgtgtcctatgcgttatgccgcagtgctagtaaaaataggagacacg
cacaaatgtttgcctctggattcagatggtgatctaaatattgttgcttctttcgatcgt
cgtggtaaacatatctacacaggcaatgcaaaaggaaaaattctggttttaaatgcagaa
acgttggaaatcgttgcgagttttcgtattattgtaggctcttcaagtgcgacggctgta
aaaagtatagaattcgcaagaagaggggacgcatttttaataaacacctcagatcgtgtt
atacgtgtttacgattcaaaggagattattgcactggggaaagatggcgaacctgagcct
atacaaaaattgcaggatttagtgaacaaaaccacatggaaaaaatgctgcttctccggg
gatggcgaatacatttgcgctggcagcgcacgccaacatgctctctacatttgggagaaa
tctattggtaatttagtgaaaattttgcatggcacgaaaggcgaactgttgcttgatgtt
gtgtggcatcccgtgcgtccgattatagctagcataagctcgggactcgtttccatttgg
gcacaaaatcaagtggaaaattggtctgcatttgcgccagacttcaaggagctcgatgaa
aatgttgaatatgaggaacgcgaatcggaatttgacataactgatgaagataaatcggtg
gatttgaatgctgatgcgaagcaggatgaagaaattgaagtggatgtgcagaaagtagaa
ccagttgctgcattttgttcttccgatgaggagggtgaagatgaaaatgcattacaattt
ctaccaatggcgcctgaggtagaggatcctgaagatggttggactatgcaagacggtgtg
gaagtgtcattgtcgaaagaaaacgaagcaacatctcaggattatgacgatgcaacggcg
gcgaaaaagcggaaagtgaataattatgatatctcattgccggatgctcctgtggatgag
acacatccgctaatttcaagcaaaacaaataaggacaagcaaccggtaggtggaaagaaa
acagctggacgtccaaaaaaatag
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