Rhagoletis zephyria (snowberry fruit fly): 108379235
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Entry
108379235 CDS
T08513
Name
(RefSeq) PC4 and SFRS1-interacting protein
KO
K25057
PC4 and SFRS1-interacting protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108379235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108379235
Spliceosome [BR:
rze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108379235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEDGF
PWWP
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
108379235
NCBI-ProteinID:
XP_017491051
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MGKEKKQFNIGDLVFAKVKGYPAWPAKITKYNNKKYSVYFYGTGETANIKVEDLFLYAES
KEKFATDKNLKRSNFREAIEQIEAALNGEDSAPIDLPGAAALGDETLDDGTEAFADITAE
DCQMDESAIVVGIEEGKDVANQIDEQLRAHKIKEDKQVPLVTSTTDNPELVSRSGRKIKT
KRYIDEVQDGPSLSHSPPSKKKVPAEGVSSDAKKSAKKSGSSSKPTATITPTVKPSGGNK
SELFNNLLLAFVPPAKCVGIKLDFGKPESFPSTAERTKWEEKARKDAEELKEKLEIGQIK
LEAVKDRVIINPPRAKIHQDAANRFTNQMIEQEDALFVERDFIQISQQLRESLGLKSADV
NRCVDLLKQYKDFELTQLMLLRNPDCVDIIRRLRRYVGNLKEWSLSADEEIEFKAKAETI
RNEAVIIYNYFKKLFKISGDQQFWEPFCDQVKTYKECTKHISEQNRITMSEKAYMNICAN
RNRDEKNSENKEIGSKSNVEKEHLNEESGITMESQKQGSGMMEDNAELGTEDSLVIAESN
VLETRVES
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagaaacaatttaatattggcgacttggttttcgctaaggtaaagggc
tatccagcatggccagcaaagattactaagtacaacaataaaaagtacagcgtgtacttt
tacggaacgggagagactgcaaacatcaaagtggaggatcttttcctatatgcggaaagt
aaagaaaagtttgctaccgacaaaaatcttaagcgttcaaactttcgtgaggctattgag
cagatagaggcggcattaaacggagaagattcggctcctatcgatttaccgggtgctgca
gcgttgggagacgaaaccttagatgatggcactgaggcattcgcggatatcacggctgaa
gattgccaaatggatgaaagtgccatagttgtcggaatagaagaagggaaagatgtagca
aatcaaattgatgaacaattgagggcacataaaataaaagaagataaacaagtgccacta
gtaacgtctacgacggataacccggaattagtcagccgcagtggtcgcaaaattaaaaca
aagcgatacattgatgaagtacaggatggaccctctttatctcattcaccaccttcgaag
aaaaaagtaccagcagaaggtgtatcttctgatgcgaaaaaatctgccaagaaatcgggc
agctcctctaagccaacagctaccattacgcccaccgttaagccctctggcggcaataag
agtgaattatttaacaatttattactagcttttgtgccgccagccaaatgtgttggcatc
aagttggacttcggaaaaccggagtcatttccaagtacggctgagcgaactaaatgggaa
gagaaagctcgaaaagatgctgaagaattaaaggagaagctagagattggccaaattaaa
ctagaagctgtaaaggatcgtgtgatcataaatcctcctcgagcaaagattcatcaagat
gctgcaaatagattcaccaatcagatgatagagcaggaggatgcgcttttcgttgagcgc
gactttatacaaatatcacagcaattgcgtgaaagcttgggattgaaaagtgctgacgta
aatcgttgtgtggacctactcaagcaatataaagatttcgaattaacacagttaatgttg
ttacgtaatccagattgtgtggacatcataaggcgcttacgccgctatgttggaaatttg
aaagaatggtcactgagcgccgacgaagaaattgaattcaaagccaaggcggaaaccata
cgcaacgaagcagttattatatacaactactttaaaaaactgtttaaaatttcaggcgat
cagcagttttgggaacctttctgtgatcaagtaaaaacgtacaaagaatgcacgaaacat
attagtgagcaaaatcgcatcacaatgagtgagaaagcgtatatgaatatttgtgctaat
cgcaatagagatgagaaaaactcagaaaataaagaaatagggtcaaaaagtaatgttgag
aaggaacacttgaacgaagaatcgggcataacgatggaaagtcagaaacaaggatcagga
atgatggaagacaatgctgaattgggtacggaagattccctcgtcatcgctgaaagcaac
gtacttgaaacgcgcgtggaatcctaa
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