Rhagoletis zephyria (snowberry fruit fly): 108379296
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Entry
108379296 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rze03016
]
108379296
Enzymes [BR:
rze01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
108379296
Transfer RNA biogenesis [BR:
rze03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108379296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
108379296
NCBI-ProteinID:
XP_017491130
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MGSEVEAKKPKISVNAGENNPNCAHWVHRKKRYCKMTVKAGQRYCGEHQPSVFSESSQLA
TEADDNVRIPCPLDAKHTVFKKKLQKHLQICNARDKGDAPAYIEKGINLGMTDVVSTDYS
KLRIHDLPDEEFYKIVSTIKALYAKFVENTIESIHQHHKLLETELANSDYGHETRKHLLQ
ASALLGILDSEKQILASTSYVEFGAGKGQLAYYLAHLLVTTASQVVLVDRMSLRHKKDNK
IEDRSLVHRIRADIADFRMSGLKKLRSTRRCVAVSKHLCGAATDLTLRCITQPRCIDEDS
KSPGTEYVLIALCCHHRCDWQVYVGKSFFQEHGLTSREFAVITKMASWAICGTGMSRERR
RALEEQSQKPEEVADANSKQRLSLAERERIGGMCKRILDYGRLQYLRSHGFKATLKYYVD
RDVTLENVCLIARKIDSSECPEDEKEPSNY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgaagttgaggcgaaaaagccaaaaataagtgtaaatgctggtgaaaataat
ccaaattgtgcgcattgggtgcatcgcaagaaacgttactgcaaaatgacagtcaaggct
gggcaaaggtattgcggagagcaccagccttccgttttttcggagtcatctcaactcgca
accgaggccgatgataacgtgcgcatcccttgtcccttggatgcaaaacatacagttttt
aagaaaaaactacaaaaacatctgcaaatttgtaacgcacgagacaaaggcgatgctcca
gcatacatagaaaagggcataaatttgggcatgaccgatgtagtatctactgactacagc
aaattaaggatacatgatttgcctgatgaagaattctataaaatagtatcaactataaaa
gcgttatatgcaaaatttgtggaaaacaccatagagtcgatacatcagcatcacaagttg
ctagaaacggaattggcgaattcggattatggccacgagacgagaaagcacttgctacag
gcatccgcactcctaggtatattggacagtgaaaagcaaatactggcaagtacgagctat
gtagaatttggtgcaggtaaaggccagcttgcttactatttagcacatttgctagtcact
accgcttctcaggtggtgcttgttgaccgcatgtcgttgcgtcacaaaaaagataataaa
atcgaagatcggtcgctagtgcaccgcattcgtgcagatattgctgactttcgcatgagt
ggcctgaaaaagttgcgaagcacacgacgctgcgtagccgtttcgaagcatttgtgtggt
gcggctacagacttgacgttgcgctgtataacgcaacctagatgtattgatgaagatagt
aaatctcctggcactgaatatgtacttatagcactgtgttgtcaccaccgctgcgattgg
caagtgtacgtaggtaaaagcttttttcaagagcacgggctgacgagtcgagagtttgct
gtgatcaccaaaatggcaagttgggcaatctgtggaacaggtatgagtcgagaacgaaga
cgcgcattagaggaacaatcacaaaagcccgaagaggtagctgatgctaactccaaacag
cgactgagtttggctgagcgggaacgcattggtggcatgtgcaaacgtattcttgactat
ggtcgattgcaatatttaagaagccatggctttaaagcgacgttaaagtactatgtagat
cgagatgtgacgctggaaaatgtctgtcttattgcaagaaaaatcgattcctctgagtgc
ccagaagatgaaaaggagccctccaactactga
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