Rhagoletis zephyria (snowberry fruit fly): 108379766
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Entry
108379766 CDS
T08513
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03430
Mismatch repair
rze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108379766
03460 Fanconi anemia pathway
108379766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rze03400
]
108379766
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108379766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108379766
NCBI-ProteinID:
XP_017491606
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MEPGVIKKLDEVVVNRIAAGEIIQKPSNALKELVENRLNSFLDAKATHIQVTVKSGGLKL
LQIQDNGTGIRREDLPIVCERFTTSKLSKFEDLSNIGTFGFRGEALASISHVAHLSIQTK
TANESCGYKATYEDGLLKGPPKACAGNQGTTITVEDLFYNMPQRRQCLKSPAEEMQKICE
VMSKYAVHNSNVAFTLKKYGEQPAVRTVGSNSREENISHIYGPQIGGTLLPVDYEDDVHK
FKMTALVTKVDYSAKRGTMLLFINHRLVDSAALKTAIDGVYSTYLPKGMHPFIYISLEMA
PKQLDVSVHPTKHEVHFLYEDEIIDKIKRRIELKLLGSNAARTFYKQLRFSVVPSSEHNI
EEAEVKNKDKERNDKDRVRTDSKEQKLGKFLLQKQTSEPTTNSNSTSIGNVTDDSLCVGT
SRKSQVQLTSVKKMQDNIERRLNIMLRKTLKELVFVGIVDQTFALFQQETKLFLCNTIKV
CEELFYQRLLFEFQNLPHIKLEPSLNIREAVLIALDCEEAGWSPADGNKSELADRASNIL
LEKAPIMREYFSLRITEEGQLETLPAILPQHYPCSTHLPLYLLRLATEVDWESEIECFET
FCRETARFYALTSCLEMGLQPQRHKWLVEHILYPGLKRYLLPPNNLRQHLYELTNLSRLY
KVFERC
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggcgtgataaagaaattagatgaagtcgttgtaaataggatcgcagctgga
gaaatcattcaaaagccgtctaacgcactcaaagagctcgtcgagaacaggttgaatagt
tttctagacgcgaaagcaactcatatccaggtaactgtgaaatctggtggcctgaaacta
ttgcagatacaagacaatgggacaggcatacgacgagaggatcttcctatcgtgtgtgaa
cggtttacaacgtcaaagctatcgaaattcgaagatttaagcaatattggaaccttcgga
tttcgcggagaagctttggcaagcataagccatgtggctcacttatccatacaaactaaa
acagctaatgagtcctgtggctacaaggccacatatgaggatgggctattgaagggaccc
ccaaaagcttgtgctggaaatcaaggaacaactattaccgtggaagatctcttctataat
atgccacagagacggcagtgtttaaaatcacctgccgaagaaatgcaaaaaatttgtgaa
gtcatgtccaaatatgcggtccacaattcaaacgttgccttcacactgaaaaagtatggc
gaacagccagcagtacgcacagtaggcagtaattctcgcgaagaaaatatatctcacata
tacggaccgcaaatcggtggcactttgttacccgttgattacgaagacgatgtacataaa
tttaaaatgaccgcactggtaacaaaggtagactattcagctaagcggggcacaatgtta
ctgttcataaaccatagactagtggattctgctgccctaaaaacagccattgacggagtc
tacagcacctacctgccaaaagggatgcacccttttatttatattagtctagaaatggct
cccaaacagttggatgttagtgttcatccaacaaagcatgaagttcactttctgtatgaa
gatgaaataattgataaaatcaaaaggcgaatagaattaaagttactgggtagtaatgca
gctcgtactttttacaaacagctacgtttctcagttgtacccagttctgaacataatatc
gaggaggcagaggtaaaaaataaagacaaggagcgtaatgataaagatcgtgtccgcacc
gattctaaagaacaaaaattaggaaagtttcttttgcaaaagcaaacatctgaacctacc
accaattcaaattctacgagtatcggtaatgtgactgatgacagcttgtgcgttggtact
tcgcgcaagtcgcaggttcaacttacaagcgtaaagaaaatgcaagacaatatagagcga
cggctcaatattatgttgcgtaagacacttaaagagcttgtttttgtgggaatagtggac
caaacatttgccctgtttcagcaggaaactaagctatttttatgcaatacaatcaaggtt
tgtgaagaacttttttaccagcgtctcttattcgaatttcaaaacctaccgcacattaaa
ttggagccatccctaaatattagggaggctgtattaattgccctcgattgtgaagaggct
ggttggtcgccagcggatggaaacaaaagtgaacttgctgatcgtgcaagcaatattctt
cttgaaaaggctccaataatgcgtgaatacttttcattgcgcatcaccgaagagggccaa
ctagaaactctccccgctattttaccgcagcactatccctgcagtactcatttaccatta
tacttattgcgtctggctacagaagtggattgggaatcggaaatagaatgttttgagaca
ttttgccgcgaaacagcccgcttttatgcacttacttcctgtttagaaatggggttacaa
ccacaacgacataaatggctagtagagcatatcttatatcccggcttgaaacgatactta
ctgcctcccaataacctcagacaacatttatatgaactaacaaatttatcacgattatac
aaagtgtttgaacgatgctaa
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