Rhagoletis zephyria (snowberry fruit fly): 108379906
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Entry
108379906 CDS
T08513
Name
(RefSeq) puff-specific protein Bx42
KO
K06063
SNW domain-containing protein 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
rze04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108379906
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108379906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108379906
Spliceosome [BR:
rze03041
]
Complex B
Other components
Prp19-related factors
108379906
Complex C
108379906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
CoaE
Motif
Other DBs
NCBI-GeneID:
108379906
NCBI-ProteinID:
XP_017491759
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MSLSSILPSPSNPVWDREDERRVAQKSRIIGAPMGALVSAKIAAPPYGQRKDWIPRTEAD
FGDGGAFPEIHVAQYPLCMGSPSNLNKKSNALAVRLDEKGKIKYDAIARQGHGKDKIVYS
SISQLLPAEVLAEDAEELRRPDAETVADTTEETQRALEKLTNAKIAAAMPVRHAEKTAPA
QYIRYTPSQQGDAFNSGAKQRVIRMVEAQQDPMEPPKFRINKKIPRGPPSPPAPVLHSPS
RKVTVKEQKEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQQVHISEKFAKMAEALYIA
DRKAREAVEARATLEKKLAQKEKEKKEDMLRMMAQRAREERAGLRQPDDPAALNPETRER
NELRAERHRERQRDRNLARAAPEKRSKLQRERERDISEQIALGMPAKTSGNGETMFDQRL
FNTTKGMDSGYGDDEVYNVYDKPWRDSNSLASHLYRPSKQLDNDAYGADLDRIVNTQRFV
PDKEFSGTSRGAGSAAQRSGPVQFEKEEDPFGLDQFLNMAKKAPKRSEDKSDRSNSEKKR
RKD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatcaagtattttaccttcgccttcaaacccagtttgggacagggaagatgaa
cgccgcgttgcacaaaaatcgaggattattggtgcacccatgggtgctttagtgtctgcg
aagattgctgcaccgccttatggccaacgcaaggattggataccacgcaccgaagcagat
ttcggagatgggggtgcctttcctgaaattcacgtggctcaatatccattgtgtatggga
agtccttctaatttaaacaagaaatcgaacgctctagcagtacgtctagatgaaaaggga
aaaatcaaatatgatgctattgcccggcaagggcatggaaaggacaaaattgtttattcg
tctatatcacagttactcccagcggaagttctcgctgaagatgcagaagaactgcggcga
cctgatgctgaaaccgttgcagatacaactgaggaaacgcaacgagctttggaaaagtta
acaaatgcgaagatagctgctgctatgccagtgcggcatgctgagaaaacagctccagca
cagtatatacgttacacgccatcacaacaaggtgatgccttcaattctggagcaaagcaa
agagttatacgaatggttgaggcacaacaagatccaatggaaccaccaaagtttcggata
aataaaaaaataccccgtggtccaccatcacctcccgcaccggtactgcactcgccttcg
cgcaaagttactgttaaagagcaaaaggaatggaagataccaccttgcatttcgaattgg
aagaatgccaagggttatacgattccgctggataaacgtttggctgctgatggccgagga
ttgcaacaagttcatattagtgaaaaattcgcaaaaatggctgaggctttatacatagct
gatcgtaaagcccgagaagcggtagaggcgcgtgcaacgctcgaaaagaagctggcgcaa
aaagaaaaagagaagaaggaagatatgctaaggatgatggcgcagcgtgctcgagaggag
cgcgctggtctgcgtcaaccggatgacccagctgctttgaatccagaaacacgcgagcgt
aatgagctgagagccgaacgtcatcgtgaacgtcaacgtgatcgaaatttggcacgtgca
gcaccggaaaagcgatcgaaattgcaacgtgaacgagaacgtgatatttcagagcaaata
gcgttgggtatgccagcgaagacttctggcaatggtgaaacaatgtttgaccagcgcctt
ttcaatacaacaaagggcatggattcaggctacggtgacgacgaagtatataatgtatat
gacaaaccgtggcgtgattccaattccttggcctctcatctgtacagaccgagtaagcag
ttagataatgatgcctatggagcggacttagaccgcattgtgaatacacaacgcttcgtg
ccagataaggagttttccggaacttcgcgcggtgctggtagtgccgctcaacgatctggt
ccggttcaattcgagaaagaagaggatccattcggtttggatcagttcttgaatatggct
aaaaaggcaccaaagcgatcagaggataagagtgatcgtagtaattccgagaagaaacgc
aggaaagactag
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