Rhagoletis zephyria (snowberry fruit fly): 108379940
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Entry
108379940 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-like
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
Pur_ac_phosph_N
Ig_5
Lectin_C
UL45
Sp38
Motif
Other DBs
NCBI-GeneID:
108379940
NCBI-ProteinID:
XP_017491798
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MEVVAYFSILLLISGYSDANANAEAQVSNDPQTYQPSYNKDYQPRYNPLYTNNQQPPTSQ
YENPLIQSQLDQQNSQQGGGGLLVGPQNQNNFYDQSSNALGSGTYSGAGGGISNYDPFNR
GISSTGFEYSDINNEEQNFCPEHWISFRQTCYRFIRSPKRNWLEAKKICKAYNAELLNVD
SVEKHSFILKQLIIQNQKQNRFWISARQTGPNSWANDDNSPFLVLEDSFAFDENQALENE
NLHDNRFLVQSMYQNEYNRNNQNQYYNTVPGSISNRNQNNLRGFIGPNQYGDNPFTRDRV
VYGFSKKRDRWMFMPAYDIELNLFICESRVLYNPENINLKLDDKRPFHYGLDIRDFEKIP
RGPYFVKQPNDTTFDTSKNRLINDVTLSCLAGGFPTPTYRWYREVYVNDTLEYKNIDPLT
NDRYTISGGNLIIYDPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETA
DMNWGKSIFCDPPQHYPEVKYYWARDFFPNFVQEDQRVFVSNDGALYFSSIEIVDRANYS
CSVQTSASDTGRNGPFFPLRVVPNSNYQTLIFANTFPKVFPEAPIAGDEIRLECVGFGYP
IPSYNWTRRGQPLQRNAYTTSNNRVLIIENATINDSGEYECTISNPRKTIHKSIQINIQM
KPQFTIPLKDKIKDYNGDVTFICESFAIPDVNYTWYKNAERLDPERIDKDRYIIQDNVLT
IKYLEAEKDNGMYQCGATNQLKTAFSSAQLRVLSMKPSFKKRPLESEIYAVQNGNTTIVC
DPEAAPRPKFQWKKDGQLIGAGGHRRILPSGTLIISPTSRDDEGIYTCVATNKAGTDESR
ARVIVLQELRFIQTPPLRITTQEHDLIFLQCDATYDELLDIAFIWKRNGEVLXNNHDGTE
RIIIDRNRLTVHNVTLLDGGDYECVVKSSVNEISSKTLVVIEGAPGAPGGVQVVEIGKTK
AIIEWVDGANNGRPIRYYNILGRTNWNRTWVNASTHVRGREIDRYTGRQQAEVSNLIPWC
SYEFSVAAVNDLGIGIPSAPSPIYSTYEDKPYISPRNVGGGGGKIGDLTITWDPLLPQEQ
HSHGIHYKVFWKLKGTLEWASEELKTLHNDGVAVVNIPLNNYYTEYEVKVQAINNIGKGP
ESEPVVIYSAEDMPQVAPQKPFATPYNSTAFNVTWRPIEMTRENVRGKLIGHRLKYWKTT
HDEEDAVYYLSRTTRNWALIVGLEPDTYYFVKVMAYNAAGEGPESERFEERTYRKAPQKP
PSSVHVYGINPSTVRVVWRYVSPAQDEEPIEGYKVRVWETDQNMITANNTIIPVGEKLEA
FITNLTPGKSYNMRVLAFSNGGDGRMSSPTLRFQMGKTTRNHASRHYRSGLNTILIVSLL
YLVSTYLNNK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgtggcttatttttcgatccttcttctaatatcaggatatagcgacgctaat
gctaacgccgaagcacaagtgtctaacgatccacaaacatatcagccatcatataataag
gattatcaaccacgatataatcccctttatacgaataatcaacagccacccacttcccaa
tatgaaaatccactaatacaatctcaactcgaccaacagaactcccaacagggtggtgga
ggcttacttgtcggtccgcaaaatcaaaacaacttttatgaccaatcatcgaacgctttg
ggcagtggtacctatagtggcgccggtggaggtataagtaattatgatcccttcaatcgt
ggcatttcatctacgggatttgagtattcggatattaataacgaagagcagaatttctgt
ccagagcattggatatcgttccgccaaacctgctatagatttattcgttcaccaaaacgc
aattggctagaagcgaaaaagatctgtaaagcttataatgcagaactcttaaatgtggac
agcgttgaaaaacattccttcattctaaagcaattaataatacagaatcaaaagcaaaat
cgcttctggatatccgcgcgacaaactggtcccaatagctgggcaaatgatgataactct
cctttcctcgtgttggaagattcattcgcattcgatgaaaatcaagcacttgaaaacgaa
aacttacatgacaatcgattcctagtgcaaagtatgtatcagaatgagtacaatcgtaat
aatcagaatcagtactataatacggtaccaggctcgataagcaatcgaaatcaaaacaat
ttgcgcgggtttattggaccgaatcagtacggtgataacccctttacaagagatcgtgtt
gtttatggcttctcgaagaagcgcgaccgatggatgtttatgcccgcatatgacatcgag
ttaaacttgttcatttgtgaatctagagttctctacaatccagaaaatataaatctgaaa
ttggacgacaaacgcccatttcactatggcttagacattcgggattttgagaaaattcca
cgcgggccttattttgtgaagcaacccaacgataccacatttgatactagcaagaatcgt
ctcataaatgatgttacactgagttgtttagcaggtggatttcccacgcccacttatcgc
tggtatcgtgaagtttatgttaacgatacactcgagtataagaatatcgatccgctaacc
aatgatcgttacacaatttctggtggaaatctcataatttatgacccaaaacaggcactg
gatcaaggagcataccattgcgtggcagagaacaaatttgggcgcattcgttcagagagt
gcgcatttgaactttggatttattatggagtttaatcttaaacgatcagctgaaactgcc
gatatgaattggggaaaatctatattctgtgatccaccacaacattatccagaggttaaa
tattactgggcgcgtgatttttttccaaatttcgttcaagaagatcaacgtgtttttgta
tctaatgatggtgccctatacttttcatctattgagattgtcgatcgtgcaaactattcg
tgcagcgttcagacttcagcttccgatacaggccgtaacggtccatttttcccactaaga
gttgtgccgaacagcaactatcagacattgattttcgcaaacacattccctaaggtattc
cccgaagcacctatcgctggtgatgaaattcgtctcgaatgtgtcggcttcggatatccg
attccatcgtataattggacgagacgtggtcaacccttacagcgaaatgcatacacaaca
agcaacaatcgtgtgctaatcattgaaaacgcgaccataaatgatagtggcgagtatgaa
tgcactatttcaaatccacgtaaaacgatccataagtcgatccaaataaatattcaaatg
aaaccacagtttacaattccactgaaagataaaattaaggattataatggcgatgtgaca
tttatttgcgaatcgttcgccataccagatgtcaattatacgtggtataaaaatgccgaa
cgcttagatcctgaacggatagataaagatcggtatattatacaggacaacgtccttacc
ataaagtatttagaggcggaaaaggataacggaatgtatcagtgtggtgctacgaatcaa
ttaaagactgcgttttcatctgcacaactacgcgttctttcgatgaaaccgtcattcaag
aaaagaccactagaatctgaaatttatgctgtacaaaatggcaatacgaccatcgtttgt
gatcctgaggcggcccctcgacccaaatttcagtggaagaaggatggccagcttattggg
gctggtggacatagacgcatattaccaagtggcacattgataatttcacctacgtcacgt
gacgatgagggtatatacacatgcgttgccacaaataaagcaggcactgatgagtcacgc
gcacgagtaatcgtattgcaggaactgcgctttatacagacaccaccactacgtattacc
acacaagaacacgatctaatattcctacagtgcgatgcaacttacgatgagttgcttgat
attgcattcatttggaagcgaaatggagaagtactgncgaacaatcacgatggcacagaa
cgaattataattgatcggaatcggcttactgtacataatgtcacactgctcgatggtgga
gactatgagtgcgttgtaaaatcttcggtgaatgagatctcatccaaaactttggtagtc
attgagggtgcacctggcgcacctggtggtgtacaagttgttgaaattggaaaaacaaaa
gcaataattgaatgggtggatggcgccaacaatgggcgaccgatacgttactataacata
cttggccgcaccaactggaatcggacatgggtgaatgcatccacacatgttcgtggtcgt
gagatagatcgatatactggtcgtcaacaggccgaagtttcaaatctaataccctggtgc
tcttacgaattcagcgtagctgctgtcaatgacctgggcattggcattccatctgctcca
tcaccaatatacagcacgtacgaagataagccgtatatttcgccgcgtaacgttggtgga
ggcggtggtaaaattggtgatttgacaattacgtgggatcctctattgccgcaagaacag
catagccatggtattcattataaagtgttctggaaactaaagggcacactagaatgggcg
tcagaggaattgaaaacgctgcataatgatggcgtagcggtcgtcaatataccgcttaat
aactattataccgagtatgaggtgaaagtccaggccattaacaatattggtaaggggcct
gagagtgagccggtagttatatattccgcagaagatatgccgcaagtggcaccgcaaaaa
ccatttgccacaccatataactctacagctttcaatgtaacttggcgacctatcgaaatg
actcgagagaatgtacgcggtaaactgattgggcacaggttgaaatattggaaaacgaca
catgatgaggaagatgctgtctattatttatcacgtactaccagaaattgggcgctcata
gttggcctggaaccagacacgtattattttgtgaaggtgatggcttataatgcggcaggc
gaggggccggaaagtgaacgttttgaagagcgtacctatcgaaaagcgccacaaaagccg
ccatcttccgttcacgtatatggtattaatccgtccacagtgcgcgtcgtatggcgttat
gtttcaccagcacaagatgaggagcctatcgaaggctacaaggtacgagtttgggaaaca
gatcaaaatatgataacggccaataacacaataataccagtgggcgaaaagttagaagca
ttcatcacaaatcttacaccaggaaagagctataacatgcgtgtattggcattcagtaat
ggcggtgatggtcgcatgtcaagtcctacattgcgcttccaaatgggtaaaacaacgcgg
aatcacgctagccgtcactaccgcagtggccttaatacgatactaatcgttagtttattg
tacctcgtttcaacgtacctcaacaataaatga
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