Rhagoletis zephyria (snowberry fruit fly): 108379994
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Entry
108379994 CDS
T08513
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108379994
04121 Ubiquitin system [BR:
rze04121
]
108379994
Transcription factors [BR:
rze03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
108379994
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108379994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
DUF659
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
108379994
NCBI-ProteinID:
XP_017491852
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MAPTNKRSSLWLHFTEKTSKEAICKFCGVLVKLGGGTSNLKGHLQRNHPGWDNSNNKCSD
PEVQNLETSSSETEIISSFTASSTSSQPSIIDAFDKQNQFKSGGSKETILTQSLIYMICK
DNLPFSCTEKTGMKKFLKVAVPRYKPPSRATIVRLIEGKYESLHLVVCGALKNLSSLALT
TDIATVMNSTRSFIVLTGHYFDEKACSVKSLVFGLKELTPHHTARNICLDLKEIFDHWNI
EPRIVTSVTTDNGANIVAAVKDLFPSRSNSIHVSCYAHNINLVVSKGLGAVKELVAIIEK
VKLIVAFFKHSNVAQDQLRQEQEKDGRKDGTFLYLIQEVSTRWNSTLHCLQKFKELSGYV
AKILANFVSKKAPSMITSSELAIIGECIALLLPLENATNDISGDSYVSASLVIPFTHCLQ
LSLTKICATYTETIQLKDVLLQQVKCRLLPLESNILLATATVLDPRFKKTHFQSPINCAN
AIDFIKKEIEQRTAKVGNTSPVLHSRSDTSEPKGYSLWDVHDEFSTQNNIGFND
NT seq
1603 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctacaaataagagaagttctttgtggttacatttcacagaaaaaactagcaaa
gaagcaatttgtaaattttgcggcgtgttggtgaaattgggaggtggcacatcgaattta
aaaggtcaccttcaacgcaaccaccccggatgggacaacagcaataataaatgcagtgac
ccagaagtacaaaatttagaaacttccagcagcgaaactgaaataatttcatccttcact
gcatcttccacgtctagtcaaccatcaattattgatgcttttgataagcaaaaccaattc
aaaagcggaggaagtaaagaaacaattctgacacaatccttaatttatatgatttgtaag
gacaaccttccatttagctgcactgaaaaaacaggcatgaaaaagttccttaaggtcgct
gtgcctcgctacaaaccgccaagccgggcaactattgtgagacttattgaagggaaatac
gagtccttacacttagtcgtttgtggtgctttaaaaaatttaagttcactggcccttaca
actgatattgccacagtcatgaactccactcggagttttattgtgttgactggacactat
tttgacgaaaaagcgtgcagcgtgaaatctctggtttttggtttaaaagagcttactcct
catcatactgcaagaaacatatgcctcgacctaaaggaaatctttgatcattggaacatt
gaaccccgcattgttacatcagtaacaactgacaatggtgcaaacattgttgccgctgtt
aaggatctttttccttcaagatcaaatagcattcatgtgtcctgctatgcccacaatatt
aatttggtggtctccaaaggattgggcgctgttaaagagctggtagctataatagaaaaa
gtgaagcttattgtggcattcttcaagcatagcaatgtagctcaagatcagttgaggcaa
gagcaagaaaaagacggtagaaaagatggtacattcttgtatttaattcaggaagtctcg
acgcgttggaactccactttgcactgtcttcaaaaatttaaggaattatcaggctatgtt
gcaaaaattttagcaaattttgtctcaaaaaaggcaccatctatgattacttcgtctgag
cttgcaatcattggcgaatgtattgcacttttattgccattagaaaatgcaacaaacgat
atatcaggggacagttatgtttcggctagtttggtaataccattcacacattgcttacag
ctgtcactgacgaaaatatgtgccacttatacagaaaccatacaactgaaagatgtactg
ctacagcaggtaaaatgtcggctactgccattagaaagcaatatactgctcgccactgcc
actgttcttgaccctaggtttaagaaaacccattttcaatcgccgataaattgtgcaaat
gcaattgattttattaaaaaggaaattgaacagcgaacagctaaagttggaaatacttct
ccagttcttcatagcagatctgacacctccgaacctaagggctatagcttgtgggatgtc
cacgatgaattttcgactcaaaataacatcggttttaacgacg
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