KEGG   Rhagoletis zephyria (snowberry fruit fly): 108380273
Entry
108380273         CDS       T08513                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108380273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rze03019]
    108380273
   03036 Chromosome and associated proteins [BR:rze03036]
    108380273
Messenger RNA biogenesis [BR:rze03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     108380273
Chromosome and associated proteins [BR:rze03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     108380273
    COMPASS/SET1 complex (yeast)
     108380273
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40_Gbeta Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C DSE1_N Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_EML Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_WDR75_1st PAC11 NBCH_WD40 TRM82_WD Beta-prop_DCAF4 Beta-prop_RIG_2nd MIOS_WD40
Other DBs
NCBI-GeneID: 108380273
NCBI-ProteinID: XP_017492135
LinkDB
Position
Unknown
AA seq 293 aa
MDFSSDGKNLAICCETNKINLFDCEKGTHIDLPFIDCYKYGVGIIKYANNSHPHYVIHSS
TILDDHIRVLNLNSRQYKVYFKGHNNTVTSLSISPYDDTFLSGSKDNTAKLWDLRSSRFR
GFVKLDGHPVVNYDPEGLIFAIGINSESINLYDMRYYEKGPFKVFELPSNMRGNWTSLKF
SPNGKSIMINAEGSLIHLIDAFTGKPLHDPLNGRLNQGCRSLEASFSPDSNLIFSGSDDG
KSIIFWEQSTGKQVLILKSSHMFPVKCVEFNPRLTMFASAGKELHFWVPANDK
NT seq 882 nt   +upstreamnt  +downstreamnt
atggacttctcaagcgatggcaagaatctggccatctgttgcgagactaataaaatcaat
ctatttgattgtgaaaagggtactcatatcgatttgcccttcatcgattgctacaagtat
ggcgttggaataattaagtacgcaaacaactcccatccccattatgtgattcattcaagt
accatattggacgatcatattcgagttttgaatttaaactctcgccagtacaaagtttac
ttcaaaggccacaataatacggtcacttcactttctatttcgccatacgatgacactttc
ctctctggatcaaaagataacacggccaaactttgggatctgaggtcgtcacgatttaga
ggatttgttaagctcgatggtcaccctgtggtcaattatgatccagaaggattgatcttt
gcaattggcatcaacagtgaatcaattaatctgtacgatatgagatattacgaaaaagga
ccgttcaaagtcttcgaactgccatcaaatatgaggggcaactggaccagcttaaagttt
tcgcctaatggaaagtctatcatgatcaacgcagagggaagtttaattcaccttattgac
gcatttactggaaagcctctacacgaccctctgaatggacgtctcaaccaaggttgtcgc
tctctcgaagcatcattttcccccgactcgaacctcatttttagtggttcggacgatggc
aaatctatcatcttctgggaacaatcgaccggcaaacaagttttaatcttgaaaagtagc
catatgtttcccgttaaatgcgttgagttcaatcccagactcacgatgtttgcatctgct
ggcaaggagttgcacttctgggttcctgctaatgataaataa

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