Rhagoletis zephyria (snowberry fruit fly): 108380446
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Entry
108380446 CDS
T08513
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108380446
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
108380446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_8
TPR_2
TPR_CcmH_CycH
TPR_12
TPR_14
TPR_11
TPR_17
TPR_16
TPR_MalT
TPR_6
TPR_7
TPR_9
ANAPC3
Coatomer_E
ARM_TT21_4th
TPR_Slam
SNAP
TPR_10
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
108380446
NCBI-ProteinID:
XP_017492305
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MNRRYRVIEIPLKASTEEEVIELSIDNLPDVAELVDLLRNELSPLSLWLHAALTYYREGK
EEEFRDILETVRADTEKSHLQLTPWILEMSTMPDYKQDLLRILDTLAAYYVAQANKERNR
ERKKELQNKVAVLYTAGDKLTTESQNHLVGRAFFLLVDLNQNNFANALDQADQQFTFVFN
NNNANIPTLVGKACISFNKKDYKGALTYYRRCLRNNPQCPANIRLGMGHCFYKLNQLEKA
RLAFERALKLDHKCVGAMVALAIMELNKKNPEAIQNGVQMLSRAYNIDKTHPMVLNHLAD
HFFFKRDYQRVHQLALHAFQNTENEFMRAESSYQLGRAYHIQENYNQAFQYYYQSTQFAA
PSFVLPFYGLGQMYIFRGDLENAAVCFDRVLKFYPNNYETMKILGSIYAQSADPAKRGMA
RDYLKKVTEAHPDDVEAWIELAQILEQFDLQGALNSYNNAIKIFKEIAENTGREEPEIPA
EIYNNVAVLHYRLGAFEAAEENLERSLRVANDEAEHDEAYFRLIQVSIRYNFGRLYEAAY
RLVKANEVYVALLRDHPTHTDSMIRLGCLRREACHIYEASDWFKEVLQVDKDNADAWILI
ANMHCAKSEWGPGQKKYERVLGAEATKDDTYALVALGNIWLHTLFSGGKGGGTREEREKE
RRHQERAISMYRNALRQDELNLYAANGIGCVLAAKGAFNEARDVFSQVREATADFPDVWV
NIAHIYVETRQYVNAIQMYENCHRRFYPAPNTEILMYIARAYYRWGRMRQCKTVLLRIRH
VTPNDATVIFNLALVLQRIAASVLEEPKCPLRTILSAVHELNLAHRYFDHLRLNPEPTKF
DPVAAGAEEQRCKDLITQAQHHVARARRADAEEQEARRRQEAERAALRAKAQEESRAREE
ERRKVEKELIAKRQEFVAKTKSILIFDPQMEEKPKKGGGGGGRGRKSAHHGEDGFVTDSS
SNIENRTAGGGGEKTGGKKKKKKKEGKRGRKRRNRGSGGSAESDEEGGGGEVNEEERRKR
REERQQQKRKKQRKGGQKESAKKGRPSKPEKAEQP
NT seq
3166 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgccgatatcgcgtcatcgagattccgctgaaggcctccacggaggaggaggtc
atcgagctgagcatcgacaatctgcccgatgtggccgaactggtggacctgctgcgcaat
gagctgtcgcccctgtcgctgtggctgcacgccgccctcacctactaccgcgagggcaag
gaggaggagttccgggacatcctcgagacggtgcgcgcggacaccgagaagagccacctc
cagctgacgccctggatcctcgagatgtccaccatgcccgattacaagcaggacctgctg
cgcatcctcgacacgctggccgcctactacgtcgcccaggcgaacaaggagcgcaaccga
gagcggaagaaggagctgcagaacaaggtcgccgtcctctacaccgccggcgacaagctg
accacggagagccagaaccacctggtcggccgggccttcttcctcctggtcgacctcaat
cagaacaacttcgccaatgcactggaccaggcggaccagcagttcaccttcgtcttcaac
aacaacaacgccaacattccgacgctggtcggcaaggcctgcatcagcttcaacaagaag
gactacaagggggcgctcacctactaccgcaggtgcctgcgcaacaatccccagtgcccg
gccaacattcgcctcggcatgggccactgcttctacaagctgaaccagctggagaaggcc
cgcctcgcctttgagcgcgccctgaagctcgaccacaagtgcgtcggggcgatggtcgcc
ctcgccatcatggagctgaacaagaagaaccccgaggcgattcagaacggcgtgcagatg
ctctcgcgcgcctacaacatcgacaagacgcacccgatggtgctgaatcacctcgccgac
cacttcttcttcaagcgggactaccagcgcgtgcaccagctggcgttgcacgcctttcag
aatacggagaacgagtttatgcgcgccgagagcagctaccagctggggcgggcctaccac
attcaggagaactacaaccaggccttccagtactactaccagtcgacgcagttcgccgcc
ccctcctttgtcctgcccttctacggcctcgggcagatgtacatcttccgcggggacctg
gagaacgccgccgtctgctttgaccgcgtgctgaagttctacccgaacaactacgagacg
atgaagattctggggtcgatctacgcgcagtcggcggacccggcgaagcgcggcatggcc
cgcgactacctgaagaaggtcaccgaggcccatcccgatgacgtggaggcgtggatcgag
ctggcgcagattctcgagcagtttgatctgcagggcgccctcaacagctacaacaacgcc
atcaagatcttcaaggagatcgcggagaacaccggccgcgaggagccggagattcccgcg
gagatctacaacaacgtcgccgtgctgcactaccgcctgggcgccttcgaggcggcggag
gagaacctggagcggtcgctgcgcgtcgccaacgacgaggcggagcacgacgaggcctac
ttccgcctgatccaggtgtcgattcgctacaactttggccgcctctacgaggccgcctac
cgcctggtgaaggcgaacgaggtgtacgtggcgctgctgcgcgaccaccccacgcacacc
gacagcatgatccgcctgggctgcctccgccgggaggcctgccacatctacgaagcgagc
gactggttcaaggaggtgctgcaggtggacaaggacaacgccgacgcctggatcctcatc
gccaacatgcactgcgccaagtcggagtggggccccgggcagaagaagtacgagcgggtg
ctgggggcggaggcgaccaaggacgacacgtacgcgctggtggccctgggcaacatctgg
ctgcacacgctcttctcgggagggaaggggggcggcacccgggaggaacgggagaaggag
cgccgccaccaggagcgcgccatcagcatgtaccgcaatgcgctgcggcaggacgagctg
aacctctacgctgcgaacgggattggctgcgtcctcgccgcgaaaggggccttcaacgag
gcgcgggacgtcttctcgcaggtgcgcgaggcgacggcggactttcccgacgtctgggtc
aacatagcgcacatctacgtggagacgcggcagtacgtgaacgccattcagatgtacgaa
aattgccaccggcgcttctacccggcgcccaacaccgagatactgatgtacattgcccgc
gcctactaccgctggggccggatgcgccagtgcaagacggtcctcctgcgcattcgccac
gtcacgcccaacgacgcgacggtcatcttcaacctggcgctggtgctgcagcgcatcgcc
gcctcggtgctcgaggagccgaagtgccccctgcgcaccatcctctccgccgtgcacgag
ctcaacctggcgcaccgctactttgaccacctgcgcctcaatcccgagccgaccaagttt
gacccggtggcggccggcgcggaggagcagcgctgcaaggacctgatcacccaggcgcag
caccacgtggcgcgggcgcggcgcgccgacgcggaggagcaggaggcgcggcggcggcag
gaggcggagcgagcggcgctgcgcgccaaggcccaggaggagagccgtgcccgggaggag
gagcgccggaaggtggagaaggagctgattgccaagcggcaggagttcgtagcgaagacc
aagtcgattctcatctttgacccgcagatggaggagaagcccaaaaagggaggtggtgga
ggtggtcgcggaagaaagagcgcccaccacggagaggacggctttgtcaccgacagcagc
agcaacattgaaaatcgaaccgctggaggaggaggggaaaagacaggcggcaagaagaag
aagaagaagaaggagggcaagcgaggtcgcaagcgccggaatcgtggctctggtggctct
gctgaatcggatgaggagggaggtggcggcgaggtgaacgaagaggaacgtcgaaagcga
cgcgaagagcgacagcagcagaagcggaagaaacagcgaaaaggcggtcaaaaggaaagt
gccaagaagggacgcccctcaaagccggaaaaggcggagcaaccgg
DBGET
integrated database retrieval system
