Rhagoletis zephyria (snowberry fruit fly): 108381046
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Entry
108381046 CDS
T08513
Name
(RefSeq) low-density lipoprotein receptor-related protein 2-like
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
Lactonase
EGF_3
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
108381046
NCBI-ProteinID:
XP_017492947
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
YRKCQSSDVFCNAPGGLAPSDGSRLSGPCVPKEKRCDGYLDCRNGRDEEGCTGISCRLDQ
FRCANGQKCIDASLKCNHKDDCGDKSDEQGCNFPPCHHGQFRCTNALCIPSNFYCDGYHD
CADESDEANCTAIACPDNKFLCPRGGPNGTPKCILKSQLCDGKRDCEDGSDEETACSTGS
CPALSCEYRCGPSLTGGACYCPSGQAIAADNRTCMDLDECAEWGHCDQLCTNTDGSYTCQ
CAQGYSLINNSKCIAPDANNLQLIFAHDRAVVRMSAHGSDPRVLANATAASGVAYHYQRN
TLYWSDIKTRKVQSIPLDVFNGAISPLDLTLPGTWAPVALAVDWVGDKIYVADLIGQKID
VFELSGHWHAVVLGSNLTSPADLALDPTSGLMFVADGGQVLRAHMDGTHARSIVSEAAYK
ASGVTVDIIAKRVYWCDSLLDYIETVNYEGNHRIMVLRGQQVPSPSRLALFENRIFWTDA
TKQGIMSVDKYAGPTSIQVTYKAKDIREPKGIVAVHALSQPRVSNPCGNNNGGCNHMCIV
TAVKGAPTGLGYRCACHTGYQLQTDLKNCKIVREFLMYSQQRFIKGKVLEPVIEGFGDAI
LPVVSRRARFVGLDFDSRDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNEGVEGLAVDW
AAKNLYYIDSRKGTLNVLSTRNVTYRRTLLKDLKRPRAIVVHPNRGYIFFSEWDRPANIT
RANTDGTNLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHSNLDGTDIKTVNSRLV
RHPFSIVIHNEWMYITDWRLDAIIRLHKLTGEQEEMMVREPQTNRLYGVKVYSHEVQTIA
DIHPCHLNNGGCEKICFAIPRNDSVELALQTRCSCPYGERLAEDQRSCMADPNAEPPVQP
CPNSWDFTCNNQRCIPKSWVCDGDDDCLDNSDEEQNCTKPTCGSNEFQCKSGRCIPLNFR
CDQENDCGDNSDEFECGNVTCGTAQFACDNGRCIPNMWKCDSENDCGDGSDEGDFCAEKT
CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPITCLANQFKCADLRQCVEESYK
CDGIPDCNDGSDELDCPSMGPNQCNLEKHFRCKSSGFCIPIAWHCDGSNDCSDQSDEEDC
GQITCAQNFFKCNNSNCVFKAYICDGKDDCGDGSDESSLHACVPPAFKCPYGQWKCPGVS
ERCVNMTSVCDGTPDCPNGADEGEGCDLAECTHQGGLCSNGCQKTPLGATCVCPPGSDIG
EDGYTCVDMNECDPPGLCSQQCTNTKGSYFCSCTDGYLLERNKHFCKAVNHSAAFLIISN
RHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGQEPQEIIN
TGLDLVEGLAYDWVAKNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCLDPSPDA
RFIFWTDWGENPRIERIGMDGTMRETIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFC
YYNGTGRQQVLSNSHYLLHPHSLSLFEDTLYWTDRQLNRVLSANKFRGKNQTVVSHLISQ
PLSIHVHHPSLQPSYPNPCEKSNCHHLCLLSPSAKENYSCKCRPGYRLMSEGRCVEEENP
FLVVVKGTQIVDIPLNGGDARAGSLAPVIGIESSTGLDFDRKGETLYWVQGREDDDENCT
IYSTPYGGGNKTLFLGADTGVVGSPYTIAFDWLGRNLYMGNRIASNIEAVRVDGKIKYRT
IILANDGNQTSVSKPKQIVLDPNDGKLFWIDEGGFGVPVKIGRVNMNGNKPMVLKSEIDH
PVSIALDIEKKLVYYSTQYPASICVMDYHGEDHRMLLSEENAISRPRSLGILDSRLYYLD
PVYEKIVRIDLPRGDNPKVIIDNEPDLKSMIIFKKRPMMQHPCQMNNGGCEHLCIPDDVS
SRTCACGVGYRK
NT seq
5798 nt
NT seq
+upstream
nt +downstream
nt
cttatagaaaatgtcagtcgagcgatgtattctgcaatgcgcctggtggtttggcgccct
cggacggtagtcgcttgtccggtccgtgcgtgccgaaggagaaacgttgcgatggctatc
tggactgtcgcaatggacgcgacgaggagggctgcacaggcatctcatgtcgtttggatc
agtttcgttgtgccaatgggcagaagtgtatcgacgcttcgctcaagtgtaatcacaaag
acgattgcggtgacaaatctgatgaacagggctgcaattttccaccctgccatcatggcc
aatttcgttgcacgaatgccttgtgcattccatccaacttctattgtgatggatatcacg
attgtgcggatgaaagtgatgaggccaattgcacggcaatcgcatgtcctgataacaagt
tcctttgtccgcgcggcggcccgaatggcacaccaaagtgcatactgaaatctcaacttt
gcgacggtaaacgtgattgtgaggatggcagcgacgaggagaccgcctgttctaccggtt
cttgtcccgcgctcagctgtgaatatcgctgtggcccatcgcttactggtggcgcttgct
attgtccgagtgggcaggccatcgctgctgacaaccgcacctgcatggatctggatgagt
gcgccgaatggggtcactgcgatcagctgtgcaccaacaccgatggttcgtatacttgcc
agtgcgcgcagggttacagtttaatcaataattcgaaatgtattgcgcctgatgccaaca
atctacagctaatatttgcgcatgatcgcgctgttgtgcgcatgtctgcacatggtagcg
atccacgtgttctggctaatgccactgctgcttcaggtgtggcttatcactatcaacgta
acacactgtattggtccgatattaagacacgcaaggtgcaatccataccattggatgtat
ttaacggtgctatctcccccttagatcttacgctgcccggtacttgggcacccgtcgcgc
tggccgtcgattgggtgggcgacaagatctatgtggctgacttgattggacagaaaattg
acgttttcgaattgagcggtcattggcatgcggtagtgttgggctcaaacctcaccagtc
ccgctgatttggcgctagatcccacatcgggtctgatgtttgtcgccgacggtggtcagg
tgctgcgcgcgcatatggatggtacgcatgcgcgttcaattgtctccgaagccgcgtata
aagcatctggcgttacggtagatatcatcgcgaaacgcgtttactggtgcgactcgttgc
tggactatattgagactgtcaactatgagggtaatcaccgcataatggtgttgcgtggcc
aacaagtgccaagcccgtcacgactggctctgtttgaaaatcgtatcttctggacagacg
ccacaaagcaaggtatcatgtcggtggacaagtacgccggtcctacttcgatacaagtaa
cctacaaggcgaaggatatacgcgaaccgaaaggcattgtcgctgtacatgcgctgagcc
aaccgcgcgtttcaaatccatgcggcaacaataatggtggatgcaaccacatgtgcatcg
tgaccgccgtcaagggtgcgcccactggcttgggttaccgttgtgcctgtcatacgggct
atcagctgcagactgatttgaagaactgtaaaattgtgcgcgagtttcttatgtactcac
agcaacgctttataaaaggaaaagtacttgaaccagttattgagggcttcggcgatgcca
tactcccggtggtctcgagacgtgcgcgctttgttggtcttgattttgattcgcgcgatg
agtttatctactactcggacgtgctgcaggatgtgatctatcgcgtgcaccgcaatggca
cgggacgtgagattgtgcttgcctcacagaacgaaggtgtcgaagggctggctgttgact
gggctgcgaagaatttgtactacattgattcacgtaaaggcacgttgaatgtgctatcca
cgcgaaatgttacttatcggcgtacactcttgaaggatctcaagcgtccgcgcgccattg
ttgtgcatcccaatcgcggctatatcttcttctcagagtgggaccgccctgcgaacataa
cgcgcgcgaatacggatggcacaaacttgcttgtcttcaagaacgtaacacttggctggc
ccaatggtctgtcaatcgatttcaaggaagatcgcgtttactggtgtgatgcgctattag
atcacgtgcagcactctaatctcgatggtactgacatcaaaacggtcaactcacgtttgg
tacgtcacccattttctattgtgatacacaacgaatggatgtacattactgactggcggt
tggatgccattatacgtctgcacaagctcaccggcgaacaagaggaaatgatggtacgtg
aaccgcaaacgaatcggctttatggcgtaaaagtatacagtcacgaggtgcaaaccatcg
ccgacattcacccctgtcatttaaacaatggcggttgtgagaaaatttgtttcgctatac
ctagaaatgattcggtagagctagcactgcaaacacgctgctcttgcccctatggcgagc
ggctagccgaggaccaacgttcatgtatggctgatcccaatgctgagccaccagtgcagc
catgtccgaactcgtgggacttcacctgcaataatcagcggtgcataccaaaatcgtggg
tatgcgatggcgatgacgactgcctggacaacagtgatgaggagcagaattgcacaaaac
caacttgcggctccaacgaatttcaatgcaagtccggccgttgcataccactcaacttcc
gctgcgatcaggagaatgactgcggtgacaactcagacgaattcgagtgcggcaatgtca
cttgcggcaccgctcaattcgcctgcgacaatggccgctgcataccgaatatgtggaagt
gtgacagcgaaaacgattgcggcgatggctctgatgagggtgatttctgtgcagagaaga
cttgcgcctacttccagtttacctgcccgcgcactggccactgcattccacagagctggg
tttgcgatggcgatgacgattgcttcgacaaacaggatgagaaagactgtccgccgatta
catgtttggcgaaccaattcaagtgcgccgatctgcggcaatgtgtcgaggagtcctata
aatgtgacggtataccagactgtaacgatggcagtgacgaactggactgtccatcgatgg
gaccgaatcagtgcaatttggaaaaacacttccgctgtaagtcttctggtttctgcatac
ccattgcttggcattgcgatggctccaacgactgttccgatcagtccgacgaagaggatt
gtggccagatcacctgcgcgcagaacttctttaaatgtaacaactccaactgtgttttca
aggcatacatttgcgatggcaaagatgattgcggtgatggttctgatgaaagttctttgc
atgcgtgtgtgccaccagcatttaagtgcccttacggtcaatggaagtgtccgggtgtta
gtgaacgctgtgtgaatatgacttcggtatgtgatggtacgccggattgtccgaatggcg
ccgatgagggcgaaggttgcgatttagcagagtgtacacaccagggtggactttgttcga
acggttgtcaaaagacccccttgggcgccacctgcgtttgcccgccaggctcagacattg
gcgaagatggctacacgtgcgtcgacatgaacgaatgcgatccacctggactctgttcgc
agcaatgtaccaacacaaagggttcctacttctgctcatgcacagatggctatctactag
aacggaacaagcacttctgcaaggcagttaatcactctgcagctttcctaattatttcca
accgccattccatactcgttgctgatttaaaagaacaaggcttggaacgcgtgccaataa
ttgtagaaaatgtggtggcgacagcttcaaatatgcacacaggtacgattttctggagcg
acatgaaactgaagaagatttcacgtttagatcgtggtcaggaaccacaagaaataataa
ataccggtttggacttggttgaaggtctggcctacgattgggttgcaaagaacctctatt
ggttggacagcaaattgaatacgattgaagtatctgcggagaatggctcaaatcgtcttg
tgctggtgcgtgaaaatatcacacaaccacgtggcatgtgcctcgaccctagccccgatg
ctcgcttcatcttctggaccgattggggtgagaatccacgcatcgaacgcatcggcatgg
atggtacaatgcgcgaaacgatcatcaacacgaaaatttactggcccaacggtctcacat
tggacattgctacgaagcgtgtctacttcgctgactccaaactggacttcattgatttct
gctattacaacggcactggacgccaacaagttttgtccaacagtcactacctactgcacc
cgcattcgctttcactgttcgaggacacactttactggacagatcgtcagctgaaccgtg
tgctgtcggctaacaaattccgtggaaagaatcagacagtggtttcgcatctgatcagcc
agccgctctccatacacgtacaccatccctcattgcaaccatcgtacccaaatccgtgcg
agaaatcaaactgtcatcatctttgtttgctgagtcccagtgccaaagagaactattcat
gcaaatgtagaccgggttaccgtcttatgagcgaagggcgttgtgtggaagaggagaacc
ccttcttggttgtggtgaagggcacgcaaattgtcgacataccattgaacggtggggacg
cacgcgctggttcgcttgcgccagttattggtattgagagtagcactggcttggacttcg
atcgcaaaggtgaaaccctttactgggtacaaggacgtgaggacgacgatgagaattgta
cgatatactctacgccatacggcggcggcaacaaaacgcttttcctcggcgctgacacgg
gcgttgttggatctccttacaccatcgcctttgactggttgggccgtaatctctacatgg
gcaaccgcattgccagcaatattgaagcggttcgtgtggatggtaaaatcaagtatcgta
ccatcatactcgcaaacgatggtaatcaaacgtctgtttcgaagccaaagcaaatcgtac
tggatcccaacgacggtaaactattttggatcgatgaaggtggttttggtgtgcccgtga
agattggacgcgtgaatatgaatggcaacaagccgatggtactgaaatcggaaatcgatc
atcccgtgagtattgcattggacatcgagaagaaattggtgtactatagcacgcaatatc
cggcaagcatttgtgttatggactaccatggcgaggatcaccgtatgctgctctcggaag
agaacgccatttcgcgacccagaagcttgggcatcctagattccagattatactaccttg
atccagtctatgagaagattgtacgcatcgatttgccacgcggcgataatccaaaggtta
taatcgacaatgaacccgatcttaagagtatgatcatcttcaagaagcgccctatgatgc
agcatccatgtcaaatgaataacggcggttgcgagcatctctgcatacccgatgatgttt
cctcacgcacctgcgcctgtggtgtcggctaccgcaag
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