Rhagoletis zephyria (snowberry fruit fly): 108381148
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Entry
108381148 CDS
T08513
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108381148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108381148
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108381148
mRNA degradation factors
3'-5' decay
Pan complex
108381148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
108381148
NCBI-ProteinID:
XP_017493051
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MPETNSFFVSDFVKEEILKRLVKSQELPSEAALLELPARVDVYIELLALEPTPGAASYSF
NGLASSVYRATNSETGQLVCLRRFHAFTPSSANAKLLMATIDGWKKVTHANIVPLRQVFT
TKAFGDNSVIFVYDYYPASETLMGAYFANQQLQPPNGGGIIGNSHVGGNGVASSGGGGGG
GGGINGPGGPNGGQSQQQQSQQQQQQQQLSTNGYSTASRPYSQQAANTRKLLPEATIWNY
IIQISSALRIIHQSSLACRALDPTKVLLTSGWSANANNAFSNRGRNARLRLAFAGVADIL
TLDLAFLHHHGAGANPRALVAHFQQEDLLLFGRLCLALATNSLAALSRHLLAECLELVPR
SYSADLRTLIGYLLSSKATANPNKPRSIDDIMPMIGARFYMQLDHLYYRYDHLYEELAKE
ADNGRLLRLLAKLGTINERPEHQLDPNWSETGDRYMLKLFRDYLFHQCDEEGRPWLDLGH
IITNLNKMDVGSGEKICLVSRDAQNVLIVSFEELKRCFEAALADLMQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaccaacagcttcttcgtctccgacttcgtcaaggaggagattctgaagcgg
ctggtgaagagccaggagctgcccagcgaggcggccctcctcgagctgcccgcccgcgtc
gacgtgtacattgagctgctggcgctggagccgacgcccggcgccgcctcctacagcttc
aacggcctggccagctcggtgtaccgggcgacgaacagcgagacggggcagctcgtctgc
ctgcgtcgctttcacgccttcacgcccagcagcgccaatgcgaagctgctcatggcgacg
attgacgggtggaagaaggtgacgcacgcgaacatcgtccccctgcggcaggtcttcacc
accaaggcctttggcgacaactctgtgatattcgtctacgactactacccggcctcggag
acgctgatgggcgcctactttgccaatcagcagctccagccgcccaacggtggtggtata
atcggtaattctcatgttggtggaaatggcgtggcctcttcgggtggaggtggtggtggt
ggtggtggcatcaacggccctggaggacctaatggtggtcagtctcagcagcagcagtcc
cagcagcagcagcagcagcaacagctgtccacgaacggctactccaccgcctcgcgaccg
tacagtcaacaggcggcaaatactcggaagctgctgccggaggcgaccatctggaactac
atcatacagatctcctcggcgctgcgcatcatccaccagtcgagtctcgcctgtcgcgcc
ctcgaccccaccaaggtcctcctcaccagcggctggagcgccaacgccaacaacgccttc
agcaaccggggccggaacgcccgcctccgcctcgcctttgccggcgtggcggacattctc
acgctggaccttgcattccttcaccaccacggcgccggcgccaatccgcgggcgctggtg
gcgcactttcagcaggaggacctgctcctctttggccgcctctgcctggcgctggccacc
aacagcctggcggcgctcagtcgccacctgctggcggagtgcctggagctggtgccgcgc
agctactcggcggacctgcgtaccctcatcggctacctgctgagctccaaggcgacggcc
aacccgaacaagccccgctccatcgatgacatcatgccgatgattggcgcccgcttctac
atgcagctcgaccacctctactaccgctacgaccacctctacgaggagctggcgaaggag
gcggacaatggccgcctcctccgcctcctggccaagctgggcaccatcaacgaacggccg
gagcaccagctcgacccgaactggtcggagacgggcgaccggtacatgctgaagctcttt
cgcgactacctctttcaccagtgtgacgaggagggccggccgtggctcgacctgggccat
atcatcaccaatctcaataagatggacgtgggcagcggggagaagatctgcctggtgtcg
cgggacgcgcagaacgtgctcatcgtctcctttgaggagctgaagcggtgcttcgaggcg
gccctcgccgacttgatgcagtga
DBGET
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