Rhagoletis zephyria (snowberry fruit fly): 108381209
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Entry
108381209 CDS
T08513
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03010
Ribosome
rze04120
Ubiquitin mediated proteolysis
rze04137
Mitophagy - animal
rze04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
108381209
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108381209
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108381209
04137 Mitophagy - animal
108381209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rze03011
]
108381209
04121 Ubiquitin system [BR:
rze04121
]
108381209
Ribosome [BR:
rze03011
]
Ribosomal proteins
Eukaryotes
Large subunit
108381209
Archaea
108381209
Ubiquitin system [BR:
rze04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
108381209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
108381209
NCBI-ProteinID:
XP_017493110
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaaaacacttacgggcaagaccatcactttggaggtcgagccttct
gacactatcgaaaatgtcaaggctaaaatccaagataaagaaggtataccaccagatcaa
caacgtttgattttcgccggcaagcaattggaagatggtcgtactttgtccgactacaac
attcaaaaggagtcaaccctccacttggtgttgcgtctgcgtggtggtatcattgaaccc
tcattgcgtattttggcacaaaaatacaattgcgataagatgatctgtcgcaaatgctat
gctcgtctgcatccacgtgcgactaactgccgcaagaagaagtgtggacacaccaacaac
ttgcgccccaagaagaagttgaagtag
DBGET
integrated database retrieval system
