KEGG   Rhagoletis zephyria (snowberry fruit fly): 108381549
Entry
108381549         CDS       T08513                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:rze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rze03041]
    108381549
Spliceosome [BR:rze03041]
 Complex B
  Other components
   Complex B specific factors
    108381549
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz LisH_TPL Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR3_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_VPS8 WD40_MABP1-WDR62_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_HPS5 LisH_WDR26 Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_DCAF4 Ge1_WD40 Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_NWD2_C LisH_PAC1 zf_topless Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 108381549
NCBI-ProteinID: XP_017493456
LinkDB
Position
Unknown
AA seq 366 aa
MSLEIESADVVRLIEQFLKENNLHRTLATLQEESSIALNTVDSIEGFVADITAGHWEVVL
KVISQLNLPDRKLVDLYEQIVIELIEMRELGAARSLLRQTDPMARLKADNPERFLHLEQL
LAKSFFDTQEAYPEGSSREKRRAAIAAQLASEVTVVESSRLLALLGQALRWQQYQGLLPT
GSSIDLFRGKTSIREEEEETHPTRLSKVIKFGAKAHVESAAFSPDGQYLVTGTVDGFIEV
WNFITGKVRKDLKYQAEDRFMYLKSGDAVLSLAFSRDSEHLATGGASGAIKVWSVGSGTV
VRAFEGAHSGGVNCLQFNRDGTQLLSGSYDFTVRIHGLKSGKRLKEFKGHGSFVNAVTFS
ADGHQV
NT seq 1099 nt   +upstreamnt  +downstreamnt
atgtctctggagatcgagtccgcggacgtggttcgcctgattgagcagttcctgaaggag
aacaacctccaccggacgctggccaccctgcaggaggagtcctccatcgcgctgaacacc
gtcgactcgatcgagggcttcgtcgccgacatcaccgccggccactgggaggtggtgctg
aaggtcatctcacagttgaacctgcccgaccgcaagctagtggacctctacgagcagatc
gtcattgagctgattgagatgcgcgagctgggcgccgcccgcagcctcctccgccagacc
gatccgatggcccggctgaaggcggacaatccggagcgcttcctccacctggagcagctg
ctggcgaagagcttcttcgacactcaggaggcctacccggagggcagcagtcgcgagaag
aggagggcggccatcgccgcccagctcgccagcgaggtcacggtggtcgagtcgtcacga
ctgctcgcacttctaggacaggcccttcggtggcagcagtaccagggcctcctgcccacc
ggctcctccattgacctcttccgcgggaagacctccatccgcgaggaggaggaggagacg
catccgacgcgtctctcgaaggtgatcaagttcggcgcgaaggcgcacgtcgagtcggcg
gccttcagccccgacgggcagtacctggtgacggggacggtggacggcttcatcgaggtg
tggaacttcatcaccgggaaggtgcgcaaggacctgaagtaccaggcggaggaccgcttc
atgtacctgaagagcggcgacgccgtcctcagcctcgccttcagccgcgactcggagcac
ctggctactgggggcgcctcgggcgccatcaaggtctggtcagttgggtcggggacggtg
gtccgcgcctttgagggcgcccactccggcggcgtcaactgcctgcagttcaaccgcgac
gggacgcagctgctgagcggcagctacgactttaccgtccgtatccacggcctcaagtca
gggaagaggctgaaggagttcaagggccacggcagcttcgtcaatgcggtcaccttcagc
gccgacgggcaccaggtga

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