Rhagoletis zephyria (snowberry fruit fly): 108381887
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Entry
108381887 CDS
T08513
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108381887
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rze01002
]
108381887
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108381887
03036 Chromosome and associated proteins [BR:
rze03036
]
108381887
Peptidases and inhibitors [BR:
rze01002
]
Metallo peptidases
Family M1
108381887
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108381887
Coactivators
SAGA/TFTC/STAGA complex
108381887
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108381887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
Cbl_N
Motif
Other DBs
NCBI-GeneID:
108381887
NCBI-ProteinID:
XP_017493767
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MSKREYLVETHRPFKVSHQLLCITKIDFKTKSLVGFTELQIVSQVDSLPVIRLNCQQCRI
QSIYIDDYPCVFTYSDPTQDILATSSSSSSSTATAATATTTSNEQTKSGSGGSGKLGPRK
LDTFSSTHYEVIKSTDCDVGNGELVIEVPDLIDLKSAVLEHRPLRLFIAYMVENPTGGLY
FAVNNQSNQFSAAAANDQQTASSAKDDKDGDKASASASVEDDGFSPHMFSTGRSNNSRLW
FPCVDSFSESCTWAIQVTVEEAYTAIASGELTEVEHLVERRLKRFTYSLQVPTSAPNIGL
VVGPFVPVVHPHMHEVVSFAFPTLKSLLPATTEQTHKIFMHYEELLNTRYPYATYKQVFV
DNLVAKYEAYATLSLINISQLHSKAVIEQTYISRRVLAQAIAEQYFGAFISMQTTADAWL
TRGISGYLAYDYVRKAFGNNEYRTYVKRAMDKVIRYEQQFRPVVLDPSSRGYTEQDYFAV
KNFHTYSPVYEKMHRVKAFLALRMLEIYLGKTLLLQVLHKMLSLAQLAAPTRFASNNNWY
HLHTSTASFIWAISTVTGKNIDTFLKQWVFQGGHVKFTGSFVFNRKRNTVELEIKQAHVA
YTGVRRYLGPLMIWLQELDGTFKHTLQIEDNLSKHDITCHSKSRRNKKKKIPLCTGEEID
MDLSGMDMDSPVLWLRIDPEMTLLREVILEQPDYQWTYQLRYERDVIAQMESLAVLDRFN
TKQARDALLEVITSEATFYRVRCQATTCLRRVANLMGASWIGPPALLPQFRKLFGSPSCP
NIVRMNNFSHFQHYFLQMAIFRAVAGLRTLHGICPAEVLRFLFDLFKYNDNSKNAFTDAY
YRAALVDALAETVTP
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacgagagtacctcgtcgagacgcatcgaccctttaaagtatctcaccagctg
ctatgcatcaccaagatcgacttcaagaccaagagtttagtgggcttcaccgagctgcaa
atcgtctcccaggtggactcactgcctgtcatccgcctgaactgccagcaatgtcgaatt
cagtccatttacattgatgattacccctgcgtcttcacgtacagtgacccgacgcaggac
atcctggccacgtcttcgtcgtcgtcttcgtccacagctacagcagcaacagcaacaaca
acctcaaatgagcagacaaaaagcggcagcggcggaagcgggaagctgggcccgcggaag
ctggacaccttcagcagcacccactacgaggtaatcaagtcgaccgactgcgacgtgggc
aacggcgagctggtcatcgaggtgcccgacctcatcgacctgaagtcggccgtgttggag
caccggccgctgcgcctcttcatcgcctacatggtggagaaccctaccggaggcctgtac
tttgccgtcaacaaccagtcgaatcagtttagcgccgcagcagctaatgatcaacaaacg
gcatcatcagccaaagacgacaaagacggcgacaaagcttcagcctcagcctcagtcgag
gacgacggcttctcgccgcacatgttcagcaccgggcggagcaacaacagccgcctctgg
ttcccctgcgtcgactccttcagcgagtcctgcacctgggcgattcaggtcaccgtggag
gaggcgtacaccgccatcgcctccggggagctgaccgaggtggagcacctcgtcgagcgg
cgcctgaagcgcttcacctactccctccaggtgcccaccagcgccccgaacatcggcctg
gtggtggggcccttcgtccccgtcgtccacccgcacatgcacgaggtggtcagcttcgcc
tttcccacgctgaagtccctcctgccggccaccaccgagcagacgcacaagatcttcatg
cactacgaggagctgctgaacacgcgctacccgtacgccacctacaagcaggtcttcgtg
gacaacctggtggcgaagtacgaagcgtacgccaccctctccctcatcaacatcagccag
ctgcactcgaaggcggtcattgagcagacgtacatcagccggcgggtgctcgctcaggcc
atcgccgagcagtactttggcgccttcatcagcatgcagacgacggcggatgcctggctg
acgcgcggcatcagcggctacctcgcctacgactacgtgcgcaaggcctttggaaacaat
gagtaccgaacgtacgtgaagcgcgccatggacaaggtgatccgctacgagcagcagttt
cgcccggtggtcctggacccgagcagccgcggctacaccgagcaggactactttgccgtg
aagaacttccacacctactcgcccgtctacgagaagatgcaccgcgtgaaggccttcctc
gcgctgcgcatgctggagatctacctggggaagacgctgctcctgcaggtgctccacaag
atgctcagcctggcgcagctggccgcccccacccgatttgcctccaacaacaactggtac
cacctgcacaccagcacggccagcttcatctgggcgatcagcacggtgacggggaagaac
atcgacaccttcctcaagcagtgggtctttcagggcggccacgtgaagttcaccggcagc
tttgtcttcaatcggaagcggaacaccgtggagttggagattaagcaggcgcatgtggcg
tacaccggggtcaggcggtatctgggaccgctgatgatctggctgcaggagctggacggg
acgttcaagcacacgctgcagattgaggacaacctctcgaagcacgacattacctgtcac
tcgaagagccgccgcaacaagaagaagaagattcccctctgcacgggcgaggagatcgac
atggacctctcgggcatggacatggactcaccggtcctctggctgcgcatcgacccggag
atgacgctcctccgggaggtcatcctcgagcagcccgactaccagtggacgtatcagctg
cgctacgagcgggacgtcatcgcccagatggagtcgctggcggtgctggaccgcttcaac
accaaacaggcgcgggacgccctcctcgaggtgatcaccagcgaggcgaccttctaccgg
gtccgctgccaggccactacctgcctgcgccgggtggccaacctgatgggcgccagctgg
atagggcccccggcgctgctgccgcagtttcggaagctcttcggctccccctcctgtccg
aacatcgtccgaatgaacaacttcagtcactttcagcactacttcctgcagatggccatc
ttccgggcggtggccggcctgcgcaccctccacggcatctgcccggcggaggtgctgcgc
ttcctctttgacctcttcaagtacaatgacaactcgaagaacgccttcaccgacgcctac
tatagagcggcgttggtggacgccctggcggagacggtcactccg
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