Rhagoletis zephyria (snowberry fruit fly): 108382013
Help
Entry
108382013 CDS
T08513
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rze03009
]
108382013
Enzymes [BR:
rze01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
108382013
Ribosome biogenesis [BR:
rze03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108382013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Fibrillarin
CDC45
Nop14
Motif
Other DBs
NCBI-GeneID:
108382013
NCBI-ProteinID:
XP_017493901
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MGRKGNYDVKEKRGPGRKARKQGEPSPIGIFSAKLKDKKKSSLKRKDASLPDSARKRVKF
SENLVEERLMDFGDLNENVVAESDEEKDEYDLNGIDEEEDEYDVKDSDEDDDVKEKDEED
EEEDEEDDIKENDKDDEEDDDEEDKDDMKVSDSVEIGIDETLPPDISLIKQRISDILFVL
SDFNNRRQEDKTREDYLQVLKDDFCSYYNYNKFLMSKLMYLFPLDELKEFLEASEVQRPL
VIRVNTLKTRRRDLAQALINRGVNVDPVGNWSKVGLVVYDSQVPIGATPEYLSGHYMLQG
AASLVPVMALAPQENEKILDMCAAPGGKTTHIASIMRNTGVLFANDANRDRCKALTANLH
RLGIVNTIVSNYNGLKYPRIMKGFDRVLIDAPCSGTGVICKDPGVKTTKNNADILKCAYT
QKQLILAAIDCVDANSQTGGYIVYSTCSVL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaagggaaactacgatgtaaaggagaagagaggccctggacggaaagctcgt
aagcaaggcgagccgtcaccaataggcatttttagtgccaaactaaaggacaagaaaaag
agctctcttaaaagaaaagatgcatccttgcctgattcggctagaaagagagttaagttt
tctgaaaaccttgttgaagaacgtttgatggattttggagacttgaatgaaaatgtagtg
gcagaaagtgatgaagaaaaagacgaatatgacctgaatggaattgatgaagaagaggat
gaatatgacgtgaaagacagtgatgaagatgacgatgtgaaagaaaaagatgaggaggat
gaagaagaggatgaagaagatgacatcaaagaaaatgataaagatgatgaagaggacgat
gatgaagaggataaagatgacatgaaagtttccgattctgttgaaattggaattgacgaa
actctgcctcccgacatatcgctcatcaaacaacgcatctctgacattctctttgttctc
agtgatttcaacaaccgacgtcaagaggacaaaactcgggaggactatttgcaagttctg
aaagacgacttctgctcgtactacaactacaacaagtttctcatgtccaaactgatgtat
ttattcccccttgatgagctgaaggagtttttggaagccagcgaagtacagaggcctctt
gttattcgcgttaacacgctcaaaactagaagacgtgatcttgcccaggcgctaattaat
cgaggcgtcaacgttgacccagtgggcaattggtcaaaggtgggcctggttgtgtacgac
tctcaggtgcctattggcgccacaccggaatacctgtcgggccactacatgctccaagga
gcggcctcgttggttcccgtcatggctttggcccctcaggaaaatgagaagattcttgac
atgtgtgccgctcccggtggcaaaaccacgcacattgcctcgatcatgcgaaacaccggt
gtgcttttcgccaacgacgccaaccgagatcgctgcaaagcattgactgccaatttacac
cgtcttggaattgtcaacaccattgtcagcaactacaatggtctcaagtatccgcgaata
atgaaaggattcgaccgtgtgttgatcgatgcaccctgctcaggcactggtgtcatctgt
aaggacccgggtgtgaaaacaaccaaaaacaatgctgatattctcaaatgcgcttacaca
cagaagcagttgattttggctgccattgactgcgtggatgcaaattcgcagactggcggg
tacattgtctactcgacctgttctgttttg
DBGET
integrated database retrieval system
