Rhagoletis zephyria (snowberry fruit fly): 108382451
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Entry
108382451 CDS
T08513
Name
(RefSeq) protein trachealess-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108382451
Transcription factors [BR:
rze03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108382451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
108382451
NCBI-ProteinID:
XP_017494310
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All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
ILEMRKEKSRDAARSRRGKENHEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLREFS
QLGDPSWSNALSSLNALKCKANTNVFESHQGTHILQSLDGFAFALGQDGRFLYISETVSI
YLGLSQVEMTGSSIFDYTHQQDHAELAEQLGLSSQVGSSGSGHHPHHPPQAHSSHSSHSH
HSHHHHHSTSSPLPPGSVSSSASNESDSTSHHHQYGNGVGTICVSGAGDTLERQFCMRMK
STLTKRGCQHFKSSGYRSSSATSTSSSSAASASANTKIIGLVAIAIALPPPSINELRLEP
DMFVTRHSLDFKIIHCEQRVTDLLNYSPDELVGRSIYSLIHGQDVVLLKKCHLDLIHKGQ
AMSGYYRVVNKTGGYTSSNSPASAANVNGAAKAAAAAAAAGTSNAGGRATPVSCSGGGAS
TPIPGNATPNSVAGGNGGSSGGGSGAHDDQDQSVICVNYVLSAIEYTNVIMDACQLGSGK
LAMLSHAAGPLSSCTTSNSSSSNSNSSSSVSTNRASSPGKAAHGLSARSAALQLKKQQQQ
QQQQQSHHSSSTPSPERKLQLNSSPSHQHSSANNNNNSRSPRIVQQQCHSPLDHRLGPEQ
QQGNPNSNGSGHLKRRRLNSSP
NT seq
1867 nt
NT seq
+upstream
nt +downstream
nt
gattctggagatgcgcaaggagaagagccgcgatgcggcccgatctcgccgcggcaagga
gaaccacgagttctacgaactggccaagatgctcccgctcccggccgccatcacttcgca
actagacaaggcctccatcattcgactgaccatcagctacctgaagctgcgcgagttttc
ccagctgggcgacccctcctggagcaatgccctcagcagcctcaatgcgctcaagtgcaa
agccaacacgaacgtgtttgagagtcaccaagggacgcacattctgcagtcgctggacgg
ctttgcctttgctctcggccaggacggccgcttcctctacatctccgagacggtttccat
ctacttgggccttagtcaggtggagatgacaggctcaagtatcttcgattacactcacca
gcaggaccacgctgagctggcagagcagctgggcctgagcagtcaagtgggctccagtgg
cagcggtcatcacccccatcaccctcctcaagctcactcctcgcattcatctcactccca
tcattcccatcaccaccaccacagcacctcgtcccctctgccaccgggcagcgtctcctc
gtctgcctccaacgaatcggacagtactagccatcaccaccagtacggcaacggagtggg
caccatatgcgtgtccggagcgggtgacaccctggagcggcagttctgcatgcgcatgaa
gtcgacgctgaccaaaagagggtgtcagcacttcaagtccagtggatatcggtcctcctc
ggcgacctccacctcctcatcctctgctgcctctgcctctgcgaacaccaaaatcatcgg
tctggtggccattgccattgccctgccgccgccctccatcaatgagctccgcctggagcc
agacatgttcgtcaccaggcacagcttggactttaagattatccactgcgaacagagagt
gaccgatctgctgaactacagtccggatgaactagtcggccggagcatctactcgctgat
tcacggccaggacgtggtcctcctcaagaagtgccacctcgacttgatccacaagggcca
ggccatgtcgggctactaccgagtggtgaacaagaccggtggctacacnagcagcaattc
accggccagtgccgccaatgtcaatggagcggccaaggcggcggcagcggctgctgctgc
tggcacttctaatgctggtggcagggcaactcccgtttcttgttcaggtggtggtgccag
cacgcctattcccggcaatgcgacgcccaattcggtggcaggaggaaatggtggcagtag
tggtggtggtagtggtgctcacgatgaccaagatcaaagtgtgatctgcgtcaattacgt
gctaagtgcaatcgagtacacgaacgtcatcatggacgcctgtcagctgggcagtggcaa
gctggcgatgctcagccatgcagctggaccactgagcagctgcaccacctccaattcatc
ctcttccaattccaactcgtcctcatcagtgtccacaaatcgtgccagtagtccgggcaa
ggctgcacacggcttgtcggctaggtctgcggcactgcagctgaagaagcaacaacaaca
acagcaacagcagcaatcccatcacagctcgagcactccttctccagaaaggaaactgca
gctgaacagctcgccctctcaccagcacagcagtgccaacaacaacaacaactctcgaag
tcctcgaatagtgcaacagcagtgtcactcgccactggaccaccggctagggcccgaaca
gcagcagggcaatccaaacagcaatggcagtggtcacctgaagcgacgtcgtctcaactc
tagtcca
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