Rhagoletis zephyria (snowberry fruit fly): 108382969
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Entry
108382969 CDS
T08513
Name
(RefSeq) transient receptor potential-gamma protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
108382969
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rze04040
]
108382969
Ion channels [BR:
rze04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108382969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ion_trans
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
Mem_trans
Sigma70_ner
PP_M1
Motif
Other DBs
NCBI-GeneID:
108382969
NCBI-ProteinID:
XP_017494827
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MLTREDSHNTNSSAKEDDGEEEEEEDNDDDEEEEDLDDELAEELRKSFSRKLKKKTENEN
MSEGKGGGRGDSQRSTGQLQQQQQQQGAFNQFKPLTLTEKRFLLAVVRGDQPAVRRLIHE
SRPQELNINCCDPLGRSGLLMAIDNENLEMIELLIDAGVEMKDALLHAINEEFVEAVELL
LDQESVTHTPGTPHSWESTDTECETFTSDITPLVLAAHRNNYEIIKILLDRNISPIPAPH
DARCGCKECLAASKEDCLRYSRSRINAYKALSSPSLIALSSKDPILTAFELAWQLRRLSV
LEPEFKNEYLALRKQCQMFATTLLDHTRTSEELELLLNYDPNGDPLENHDRMQLSRLKLA
ISVRQKMFCAHANVQQLLASIWYKSVPGFRRRNIVAQTLQLIGIGALFPLLALAYILAPR
SALGRFTKKPFIKFICHSASYVSFLVLLMLASQRIENNPFFGSGFLFNVSSTGALPSYIE
LAIIAWVLGLIWSEIKQLWDLGINEYMSDMWNILDFINNSLYVATITLRVIAYYQTQREI
QFGTIMYDKRQMWDDFDPILLSEGLFATANIFSSLKLVYMFSVNPYLGPLQISLGRMVID
ILKFFCIYLLVLFPFACGMNQLLWYYAEMEKQT
NT seq
1898 nt
NT seq
+upstream
nt +downstream
nt
atgctcacccgagaggacagccacaacaccaatagctcggcgaaggaggacgacggcgag
gaagaagaggaggaggacaacgatgatgatgaggaggaggaagatttagatgatgaactg
gcggaggagctaaggaagagcttcagtcgcaagctcaagaagaagacggagaatgaaaac
atgagcgagggaaaaggcggaggtcgaggagatagccagcggagcactggacagcttcag
cagcaacagcaacaacaaggagccttcaatcagttcaagccgctgacactgactgaaaag
cgcttcctcctcgccgtggtccgaggcgatcagcccgcagtgaggcgcctaattcacgaa
tcacgcccccaagagctgaacatcaactgctgcgaccctctgggccgaagtggcctgctg
atggccatcgacaatgagaacctggagatgattgagctgctgattgacgccggcgtcgag
atgaaggacgcactgctgcacgccatcaatgaggagttcgtggaggcggtggagctgctg
ctcgaccaggagagcgtcacacatacgccagggacgcctcattcgtgggagagcaccgac
accgagtgcgagaccttcaccagcgacattacgccgctggtgctggccgcccaccgcaac
aactacgagatcatcaagatactactcgatcgcaacatttccccgattcccgctccacat
gacgcccgctgcggctgcaaggagtgcctcgctgccagcaaagaagactgcctgcgctac
tctcgctcgcgcatcaacgcctacaaggcgctctcctcgccctcgctcattgccctctcc
agcaaggaccccattctgacggcctttgagctggcctggcagctgcgccgcctttcagtc
ctcgagccggagttcaagaatgagtacctcgccctgcgaaagcagtgtcagatgttcgcc
accacactgctcgaccacacgcgcacctcggaggagctggaactactgctcaactacgac
ccgaatggcgacccgctggagaatcacgacagaatgcaattgtcccgcctgaagctggca
attagcgttcgccagaagatgttctgcgcccacgccaacgttcagcagctgctcgccagt
atctggtacaagagcgtgcccggctttcgccggcggaacatcgtcgcgcagacgctgcag
ctgatcggcatcggggcgctctttccgctgctcgccctcgcctacatcctcgccccccgc
tccgccctgggccgcttcaccaagaagcccttcatcaagttcatctgccactccgccagc
tacgtctcatttctcgttcttctgatgctcgcctcgcagcggattgagaacaaccccttc
ttcggaagtggctttctctttaatgtctcctcaacaggagcactgccgtcgtatattgaa
ctcgccatcatcgcctgggtcttgggcctaatctggagtgaaatcaagcaactgtgggat
ctgggcatcaacgagtacatgagcgacatgtggaacattctcgactttatcaacaactca
ctgtacgtggcgacgatcaccctgcgcgtcatcgcctactaccaaacgcagcgggagatc
cagtttgggaccatcatgtacgacaagcggcagatgtgggacgacttcgacccgatcctc
ctctcggagggcctcttcgccaccgccaacatcttcagctcgctgaagttggtgtacatg
ttctcggtcaatccctacctggggccgctgcagatcagcctggggcggatggtgatagac
attctcaagttcttctgcatctacctcctggtgctctttccctttgcctgcggcatgaac
cagctgctctggtactacgccgagatggagaagcagac
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