Rhagoletis zephyria (snowberry fruit fly): 108383084
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Entry
108383084 CDS
T08513
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rze04515
]
108383084
Cell adhesion molecules [BR:
rze04515
]
Cadherins
Cadherin related
108383084
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_Shg
Laminin_G_2
CADH_Y-type_LIR
Laminin_G_1
EGF
hEGF
Cadherin_CELSR2_9th
EGF_Teneurin
EGF_TEN
EGF_2
EGF_3
TM_ErbB1
Chordopox_A13L
cEGF
Motif
Other DBs
NCBI-GeneID:
108383084
NCBI-ProteinID:
XP_017494961
LinkDB
All DBs
Position
Unknown
AA seq
1703 aa
AA seq
DB search
MKVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDHDESSRIRYEITS
GNIGGAFAVKNMTGAIYVAGALDYETRRRYDLKLVASDSLNENSTTIVINVRDVNDLPPV
FPQTLYERTLDEELNTPFTIMQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRT
TGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVY
FGNVTENGTAGMVVMTMTAVDYDDPNEGSNAKLVYSIEKNVIEEETGSPIFEIEPDTGVI
KTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVKDINDMPPQFTKDEWFTEVDETD
GTSLPEMPILTVTVHDEDETNKFQYKVIDNSGYGADKFTMVRNNDGTGSLKIVQPLDYED
QLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNKPHFERANVEVSVFEDTK
VGTELEKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQVK
ILAIDDGSPPKTATATLTVIVQDINDNAPKFLKDYRPVLPEHVPPRKVVEILATDDDDRS
KSNGPPFQFRLDPSADDIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPIVI
KDHGSPAMTGTSTLTVVIGDVNDNKMQPGSKDIFVYNYQGQSPDTPIGRVYVYDLDDWDL
PDKKFYWESQEHPRFKLDEDSGMVTMRAGTREGRYHLRFKVYDRKHTQTDVPANISVTVR
EISHEAVINSGSIRVAGITDEDFIRVWNYRTQSLSRSKLDRFRDKLADLLNADRENVDIF
SVQLKRRHPPLTDIRFSAHGSPYYKPVRLNGIVLMNREEIEKDVGFNITMVGIDECLYEN
QMCEGSCTNTLDISSLPYMVNANKTALVGVRVDTLAECTCGARNFSKPESCRNTPCYNGG
RCVDTRFGPHCSCPAGYNGPRCQQTTRSFRGNGWAWYPPLEMCDESHLSLEFITRKPDGL
FIYNGPIVPPEREEMIITDYIALELERGYPRLLIDFGSGTLELRVKTKKSLDDGEWHRID
VFWDTENVRMVIDFCKSADISEMEDGTPPEFDDMSCQARGQIPPFNEYLNVNGPLQVGGI
YRDLFDPSLYFWHYAPNAKAFDGCIRNLVFNSKLYDLAHPGLSRNSVTGCQQTEEVCSQS
EQTARCWEHGNCVGSLSEARCQCRPGWTGPACNIPTIPTTFKQQSYVKYALSFEPDRFST
QIQLRFRTREQHGELFRVSDQHNREYGILEIKDARLHFRYNLNSLRTEEKDLWLNAVAVE
DGQWHVVRINRYGSAATLELDGGEGRRYNETFEFAGHQWLLVDKQEGVYAGGKAEYTGVR
TFEVYADYQKSCLDDIRLEGKHLPLPPAMNGTQWGQATMARNLEKNCPSNKPCSNVICPE
PFECVDLWNEYECTCGEGRVMSPDAKGCMDRNECLDLPCLNGATCINLEPRLRYRCICPD
GFWGENCELVQEGQTLKLSMGALAAILVCLLVILILVLVFVVYNRRREAHIKYPGPDDDV
RENIINYDDEGGGEDDMTAFDITPLQIPIGGPMPPELAAIKMPIMYPVMTLMPGQEPNVG
MFIEEHKKRADGDPNAPPFDDLRNYAYEGGGSTAGSLSSLASGTDDEAHEYDYLGSWGPR
FGKLANMYGDEANGKAAHAELGL
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacaaaatttatacgcattggcattgccgataaaaacgacaatccgccctac
ttcgataagtcgctttatgaagcagaagtggacgaaaacgaagatatccaacatactgtg
ctgaccgtcacggccaaggatcacgacgaatcatcgcgtatacgttacgaaattacaagt
ggtaacattggtggcgcttttgcggttaagaatatgactggtgccatttatgttgcgggt
gcccttgattacgaaacgcggcgcaggtacgatctaaaactggttgcttccgatagtttg
aatgaaaattcaacaacaattgtgattaatgtgcgcgatgttaatgatctgccgccagtt
tttccgcaaactctctacgagcgtactttggacgaggagctgaacacgccatttaccatt
atgcaggtcaccgccaccgatggcgataaggatcgcccgcagaatattgtttactttttg
acaggacaaggtatcgatcccgataatcctgccaatagtaaattcgacataaatcgtacc
acaggcgagatatttgtactaaagcctttggatcgtgatcaaccaaacggacgcccccaa
tggcgctttacagttttcgctcaggacgaaggaggcgagggactagtgggctatgctgac
gtacaagttaatttgaaggacatcaacgataacgcccccatctttccccaaggcgtctac
tttggcaacgttaccgagaacggcactgctggcatggtggtgatgacaatgacagctgta
gactatgatgatccgaatgaaggatcaaatgcgaaacttgtatattccattgagaagaat
gtgattgaagaggaaactggttcaccgatatttgaaatagaaccagacacaggcgtcatc
aagactgccgtatgctgtttggatcgtgagcgcacaccggactattcaatacaagtagta
gcgatggatggcggggggttaaagggcacggggacggcttcaatacgtgtaaaagatatc
aacgatatgccgccgcagtttacgaaagacgagtggttcaccgaagttgatgaaacggat
ggcacctctttgcccgagatgcctatactcacagtaactgtgcacgatgaggatgaaaca
aacaaatttcaatacaaagttatcgacaacagtggttatggcgccgataagtttacaatg
gtgcgcaacaatgatggcacaggttcgctgaaaatcgtgcaacctctggattacgaagac
caactacagagcaatggcttccgcttccgcatacaagtcaatgataagggtgaagacaac
gacaacgacaaataccatgtagcctactcatgggttgtggtaaaattgcgcgacatcaac
gacaataaaccgcactttgaacgtgccaatgtagaagtatccgtatttgaagacaccaaa
gtcggcacagagctggagaaatttaaggccaccgaccccgatcagggtggcaagagtaaa
gtctcatactcgatcgatcgttcttcagatcggcagcggcaatttgccatcaatcaaaat
ggttctgtgacaatacaacgctcgctagatcgcgaagtagtgccgcgacaccaagttaaa
atattagcaattgatgacggttcaccaccaaaaacggctacggccactcttacggtgatt
gtgcaggatataaacgataatgcaccgaaattcttgaaggactaccggccggtattgcca
gagcatgtgcccccaaggaaagtggtggaaatattggctacagacgatgatgatcgctcg
aaaagtaatgggccaccattccaatttaggttggaccccagtgccgatgatattataagg
gcatctttcaaagtggaacaggaccaaaagggcgctaatggcgatggcatggctgttatt
tcctctctccgctccttcgatcgtgaacaacaaaaggagtacatgattcccattgttatt
aaggaccatggctcaccggcgatgaccggcactagcacactcactgtagtcatcggcgat
gtcaacgacaataaaatgcaaccaggatctaaagacattttcgtgtataactatcaaggt
cagtctccagacacgccgattggccgcgtgtacgtttatgacctagacgattgggatttg
cctgataagaaattctactgggagtctcaagaacatcctcgtttcaagttagatgaagac
tctggcatggtaacaatgcgagctggtacgcgcgaaggacgttatcacttgcgcttcaag
gtttacgatcgcaaacacacccaaactgatgtgccagcaaatatatcggtaacagtgcgt
gaaatctctcatgaagctgtaatcaactcaggctctatacgtgttgccggcattactgat
gaagacttcatacgcgtctggaactatcgcacacagagcttgagtcgctctaaattggat
cgtttccgtgacaagctggccgatttgctgaacgcagatcgcgagaacgtggatattttc
agtgtgcaactcaagcgccgccatccaccacttaccgatatacgcttttcggcgcatggc
tctccatactacaagccagtgcgtctcaacggtattgtgctgatgaatcgcgaggaaatc
gaaaaggatgtgggctttaatatcacaatggttggcattgatgaatgcttatacgaaaac
cagatgtgtgagggttcctgtacgaatacgttggacatcagctcgttaccgtatatggtt
aacgcgaataagactgccttggtgggtgtgcgcgtagacactttagctgagtgtacttgt
ggcgcacgcaacttttcaaaaccagaatcttgtcgcaacacaccttgctacaatggtgga
cgctgtgtggatacgcgctttggcccgcactgctcgtgtccagcgggttacaatggtcca
cgttgtcagcagactacgcgcagcttccgcggaaatggttgggcttggtacccaccgttg
gagatgtgcgacgagtcacatttgagtctggagtttatcacacgcaaacctgatggcctt
ttcatttacaatggtcccattgtgcctccggagcgcgaggaaatgatcatcactgattac
attgcgcttgagctggaacgtggctacccgcgcttgcttatagacttcggctcaggtact
ttggaattacgtgttaaaactaaaaagtctctggatgatggagaatggcatcgtattgat
gtcttttgggatacggaaaatgtgcgtatggttatagatttttgtaagtctgcggatatt
agtgaaatggaggatggcacaccaccggagtttgatgacatgtcctgccaggcgcgtgga
caaataccaccgttcaatgaatatctgaatgtaaatggtccactgcaggttggtggcata
taccgtgacctctttgacccctcgctctacttctggcattatgcgcccaacgcaaaagcc
tttgatggctgcatacgtaatttagtattcaattctaaactctatgacttggcgcatcct
ggactttcacgcaacagcgtcacaggttgccaacaaacggaggaagtttgctcacagtcg
gagcaaacggcacgctgttgggaacatggcaactgtgttggctcgctttcagaagcacgc
tgccaatgccgacccggatggactggccctgcttgtaacatacccaccatacctaccacc
ttcaagcaacagagctacgttaaatatgcgctcagctttgagccggatcgttttagcacg
caaattcaattgcgtttccgtacgcgcgagcagcatggggaactgtttcgcgtttcagac
caacataaccgcgaatatggaattttagaaattaaggatgcacgtctacacttccgctac
aatctcaattcgctgcgtacggaagagaaagatttatggttgaacgcggtcgcggtagaa
gatggtcagtggcatgttgtgcgtattaatcgttatggctctgcagcgacactggagttg
gatggtggcgaaggacgtcgctacaacgagacgtttgaatttgctgggcaccagtggcta
ttggttgacaaacaagagggtgtttatgctggcggaaaggctgaatatacaggcgtgcga
acgttcgaagtgtatgcggactaccaaaagagctgccttgatgatatcaggctggagggc
aagcatttgcctttaccaccggctatgaatggtacgcaatggggtcaagccactatggca
cggaatcttgaaaagaattgcccttccaataaaccttgctcgaatgtcatatgtccggaa
ccgttcgaatgtgtggacctatggaacgaatatgaatgcacctgtggcgaaggacgcgtt
atgtcgccagacgccaagggttgtatggatcgcaatgaatgcctggacttgccatgcctc
aatggcgccacttgcatcaatttagagccacgtctgcgttaccgttgcatctgtccggat
ggcttttggggcgagaattgtgaattggtgcaggagggacagacgctgaagttgagcatg
ggcgccttggcggccatattggtctgcctgttggtcatactgattctagtgctcgtattc
gtcgtttataatcgccgacgcgaggcgcacattaaatatcccggcccggatgatgatgtg
cgagagaatattatcaattatgacgatgagggtggcggcgaggatgatatgactgcattc
gatattactccgctgcaaataccaattggcgggccaatgccacccgaattggctgccata
aaaatgccaataatgtatccggtgatgacgctaatgcccggccaggagccaaacgtaggc
atgttcatcgaggaacacaaaaagcgtgccgatggtgacccaaatgcaccgcctttcgac
gacttacgcaattacgcttatgaaggtggtggtagcacagccggctcgctgagttcgctg
gcctctggcactgacgatgaggcgcacgagtatgactacttgggttcgtgggggcctcgc
tttggtaaactggccaacatgtatggtgatgaagcgaacggtaaagctgcacatgccgaa
ttaggattgtaa
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integrated database retrieval system
