Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA): SAUSA300_2022
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Entry
SAUSA300_2022 CDS
T00323
Symbol
rpoF
Name
(GenBank) RNA polymerase sigma-37 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
saa
Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA)
Brite
KEGG Orthology (KO) [BR:
saa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saa03021
]
SAUSA300_2022 (rpoF)
Transcription machinery [BR:
saa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAUSA300_2022 (rpoF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
GerE
HTH_16
HTH_3
KORA
HTH_38
IF2_N
Volactin
NirdL-like_HTH
PhyR_sigma-like
DUF6761
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ABD20652
UniProt:
A0A0H2XE01
LinkDB
All DBs
Position
complement(2184996..2185766)
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AA seq
256 aa
AA seq
DB search
MAKESKSANEISPEQINQWIKEHQENKNTDAQDKLVKHYQKLIESLAYKYSKGQSHHEDL
VQVGMVGLIGAINRFDMSFERKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIK
KVSDELTAELERSPSISEIADRLEVSEEEVLEAMEMGQSYNALSVDHSIEADKDGSTVTL
LDIMGQQDDHYDLTEKRMILEKILPILSDREREIIQCTFIEGLSQKETGERIGLSQMHVS
RLQRTAIKKLQEAAHQ
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagtcgaaatcagctaatgaaatttcacctgagcaaattaaccaatggatt
aaagaacaccaagaaaataagaatacagatgcacaggataagttagttaaacattaccaa
aaactaattgagtcattggcatataaatattctaaaggacaatcacatcacgaagattta
gttcaagttggtatggttggtttaataggtgccataaatagattcgatatgtcctttgaa
cggaagtttgaagcctttttagtacctactgtaatcggtgaaatcaaaagatatctacga
gataaaacttggagtgtacatgttccgagacgtattaaagaaattgggccaagaatcaaa
aaagtgagcgatgaactaaccgctgaattagagcgttcaccttctatcagtgaaatagct
gatcgattagaagtctcagaagaagaagtgttagaagcaatggaaatgggacaaagttat
aatgcgttaagtgttgatcattccattgaagctgataaagatggttcaactgttacgcta
ttagatattatggggcaacaagatgaccattatgacttaactgaaaaacgtatgatttta
gaaaaaatattacctatattatctgatcgcgaacgagaaatcatacaatgtacgtttatt
gaaggattgagtcaaaaagagacaggtgagcgtatcggtttaagtcaaatgcatgtatca
cgacttcagagaacggcaattaagaaattacaagaagcagcacatcaatag
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integrated database retrieval system
