Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA): SAUSA300_2037
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Entry
SAUSA300_2037 CDS
T00323
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saa
Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA)
Pathway
saa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAUSA300_2037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saa03019
]
SAUSA300_2037
03009 Ribosome biogenesis [BR:
saa03009
]
SAUSA300_2037
Enzymes [BR:
saa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAUSA300_2037
Messenger RNA biogenesis [BR:
saa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAUSA300_2037
Ribosome biogenesis [BR:
saa03009
]
Prokaryotic type
rRNA helicases
SAUSA300_2037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DeaD_dimer
Cas3-like_C_2
Flavi_DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABD22036
UniProt:
Q2FF45
LinkDB
All DBs
Position
complement(2201245..2202765)
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AA seq
506 aa
AA seq
DB search
MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL
IEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTML
FSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDANG
RKMSALRPPHRKEVLQAREDDIKEKVENWMSKESESRLKRISTELLNEYNDVDLVAALLQ
ELVEANDEVEVQLTFEKPLSRKGRNGKPSGSRNRNSKRGNPKFDSKSKRSKGYSSKKKST
KKFDRKEKSSGGSRPMKGRTFADHQK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaactagggatttcggataatacggttcagtcacttgaatcaatg
ggatttaaagagccgacacctatccaaaaagacagtatcccttatgcgttacaaggaatt
gatatccttgggcaagctcaaaccggtacaggtaaaacaggagcattcggtattccttta
attgagaaagtagtagggaaacaaggggttcaatcgttgattttagcacctacaagagaa
ttggcaatgcaggtagctgaacaattaagagaatttagccgtggacaaggtgtccaagtt
gttactgtattcggtggtatgcctatcgaacgccaaattaaagccttgaaaaaaggccca
caaatcgtagtcggaacacctgggcgtgttatcgaccatttaaatcgtcgcacattaaaa
acggacggaattcatactttgattttagatgaagctgatgaaatgatgaatatgggattc
atcgatgatatgagatttattatggataaaattccagcagtacaacgtcaaacaatgttg
ttctcagctacaatgcctaaagcaatccaagctttagtacaacaatttatgaaatcacca
aaaatcattaagacaatgaataatgaaatgtctgatccacaaatcgaagaattctataca
attgttaaagaattagagaaatttgatacatttacaaatttcctagatgttcatcaacct
gaattagcaatcgtattcggacgtacaaaacgtcgtgttgatgaattaacaagtgctttg
atttctaaaggatataaagctgaaggtttacatggtgatattacacaagcgaaacgttta
gaagtattaaagaaatttaaaaatgaccaaattaatattttagtcgctactgatgtagca
gcaagaggactagatatttctggtgtgagtcatgtttataactttgatatacctcaagat
actgaaagctatacacaccgtattggtcgtacgggtcgtgctggtaaagaaggtatcgct
gtaacgtttgttaatccaatcgaaatggattatatcagacaaattgaagatgcaaacggt
agaaaaatgagtgcacttcgtccaccacatcgtaaagaagtacttcaagcacgtgaagat
gacatcaaagaaaaagttgaaaactggatgtctaaagagtcagaatcacgcttgaaacgc
atttctacagagttgttaaatgaatataacgatgttgatttagttgctgcacttttacaa
gagttagtagaagcaaacgatgaagttgaagttcaattaacttttgaaaaaccattatct
cgcaaaggccgtaacggtaaaccaagtggttctcgtaacagaaatagtaagcgtggtaat
cctaaatttgacagtaagagtaaacgttcaaaaggatactcaagtaagaagaaaagtaca
aaaaaattcgaccgtaaagagaagagcagcggtggaagcagacctatgaaaggtcgcaca
tttgctgaccatcaaaaataa
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