Candidatus Saccharimonas aalborgensis: L336_0141
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Entry
L336_0141 CDS
T02673
Name
(GenBank) putative ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
saal
Candidatus Saccharimonas aalborgensis
Pathway
saal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
saal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
L336_0141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saal03019
]
L336_0141
03009 Ribosome biogenesis [BR:
saal03009
]
L336_0141
03036 Chromosome and associated proteins [BR:
saal03036
]
L336_0141
Enzymes [BR:
saal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
L336_0141
Messenger RNA biogenesis [BR:
saal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L336_0141
Ribosome biogenesis [BR:
saal03009
]
Eukaryotic type
90S particles
RNase
L336_0141
Prokaryotic type
rRNA processing factors
L336_0141
Chromosome and associated proteins [BR:
saal03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
L336_0141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AGL61852
UniProt:
R4PVS9
LinkDB
All DBs
Position
complement(142273..142986)
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AA seq
237 aa
AA seq
DB search
MSGMPIGPYVQFAKETLGITYNDIQLFITALTHRSYVNEHRKSVSEHNERLEFLGDAVLE
LVVTDYLFKTFSEPEGILTSWRAALVRTESIGEAGMRLGYEPLVRMSKGEKNGSERARLQ
ILANAFEATIGSLYLDQGYQAASDFIHTHILSKLESILDEGSWRDPKSHLQEVSQRLDGA
TPVYKVISEEGPDHDKEFTLGAYVGGVLMGKGTGPSKQFAQQQAARAALKAYEKRDS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggaatgccgattggaccatatgtacagtttgccaaggaaacgttggggattacc
tacaatgatattcaactttttatcactgcattgacacatcgcagctatgtcaacgagcac
cgtaagagcgtcagcgagcacaacgagcggcttgaatttttgggcgatgcggtgctggag
ctggtggtgacagactatttgttcaagacattctcggaaccagagggcatcctgacaagt
tggcgggcggcactcgtacgcaccgaaagcattggtgaggcgggtatgcgtctcggctat
gagccgctggtacgcatgagcaagggcgaaaaaaatggttctgaacgcgcccgtttacag
atactcgccaacgcctttgaggcaactattgggtctctgtatctcgaccaagggtatcag
gcagccagcgatttcattcatacccatatcctcagcaaactcgaatcaatcctcgacgaa
ggctcgtggcgtgacccaaagtcgcacctccaagaggtatcgcagcgtcttgatggcgcg
acccctgtctataaagtcattagtgaagaaggtcccgatcacgataaagagtttactctc
ggtgcctatgtcggtggtgtcttgatgggcaagggtactggcccaagtaagcagtttgca
cagcaacaggcggcacgtgctgccctaaaggcgtacgaaaaacgcgattcataa
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