Candidatus Saccharimonas aalborgensis: L336_0272
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Entry
L336_0272 CDS
T02673
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saal
Candidatus Saccharimonas aalborgensis
Pathway
saal03420
Nucleotide excision repair
saal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L336_0272 (pcrA)
03430 Mismatch repair
L336_0272 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saal03400
]
L336_0272 (pcrA)
Enzymes [BR:
saal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L336_0272 (pcrA)
DNA repair and recombination proteins [BR:
saal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L336_0272 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
L336_0272 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGL61981
UniProt:
R4PXP8
LinkDB
All DBs
Position
complement(276306..278477)
Genome browser
AA seq
723 aa
AA seq
DB search
MVLPLPLHTFILLPANEVRIIEEMDILDGLNDAQKTAVTTTSGPLLLLAGAGSGKTKTLT
HRIAYLLAHESIWPNQILAVTFTNKAAKEMRERLAKLLDQQITRSFMPWMGTFHAVCVRI
LRQHGSEIGIASNFVIYDDDDRQGLIKQAMKELSLSADMVKPRAVSAAISSAKNEMVGPE
EYADVAQFPFQKSVAKLYARYEQRRKEAGAVDFDDLLLETVRLFRDSPKTRNHYQAQFRH
ILIDEYQDTNAAQYAIMKALIGPEKNICVVGDDWQSIYSWRGADFKNILGFERDFPGAAV
IKLEQNYRSTGAILEAAHNVISKNIERTEKKLWTTAGAGAPVQVQGVYDETEEAGVVATR
IAAQTAIGARSFGDFAVLYRTNAQSYALERALVQQRIPYQLVGGVRFYDRKEIKDIVAYL
RLLYQPNDRMSFSRIVNVPTRGIGATSLEKFLVWQSQSGMDILSALVNAEQTATLTSRAR
QALSGLGELLRRVQVKSELGVGPSELIEELLSATGYRDMLLDGSPQAEEREANLGVLISD
AKSYASLDDFLEEVALMSSADVGSTESVVTLMTLHAAKGLEFPVVFIVGMEEGLFPSMRA
LEEGPRQLEEERRLCYVGMTRAREELYLLYAGSRLQFGQRSYTTPSRFLEDMGYVAASVS
PYQRSMTNEFDEFSFSLDIGDRVRSPQFGQGEIIDIDGLAVTVSFDSGQTKKLNVEYARL
EKC
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttggtgctgccgctgccgctgcatacttttattttgctccccgctaacgaagtccgtata
atagaggaaatggatatcctcgacggacttaatgatgcgcaaaaaactgctgtgacaacc
acgagcggtccgctattgcttcttgcaggagcgggaagcggcaagacaaagacgctcacg
catcgtatcgcctatcttcttgcccatgagagtatctggccaaatcagatactcgccgtc
acattcactaataaggctgccaaagagatgcgagaacgcctggcaaagctgttagaccag
cagataacacgctcttttatgccctggatgggcacatttcatgcagtttgcgtaaggatt
ttgcggcagcatggcagcgagattggtatcgcaagtaactttgtgatctacgacgacgat
gatcgtcagggtcttatcaaacaggcgatgaaagaactgtcgctcagcgccgatatggta
aagccacgagccgttagtgcggcgatatcaagtgcaaaaaatgaaatggtgggtccagaa
gaatacgccgatgttgcacagttccctttccagaaatcggtcgccaagttgtacgcacgc
tacgaacagcgacgcaaggaggcgggtgcggtggatttcgatgatctgctactcgaaaca
gtacgactatttcgtgattcgcccaagactcgcaaccactaccaagcacaatttcgtcat
attctcatcgatgaatatcaagatacaaatgcagcacagtacgcaatcatgaaggcactt
atcgggccagaaaagaatatctgtgttgttggtgatgattggcagtcaatctatagttgg
cgcggtgctgatttcaaaaatatattgggatttgagagagattttccaggcgccgcagtt
atcaagctcgaacagaattaccgatcgactggcgctattctcgaagcagcgcataacgtg
atttcaaagaacattgaacgtacagagaagaagctgtggaccaccgctggtgcaggcgct
cctgtccaggtgcagggtgtttatgatgaaacagaagaggcgggcgtggtagcaacgcgg
attgccgcacagactgcaattggtgcgagatcgttcggtgattttgctgtactctatcgt
actaacgcacaaagttatgccctcgaacgtgcgctcgtgcagcagcggataccctatcaa
ctggttggtggcgtgaggttttatgaccgtaaagaaataaaagatatcgtggcatatctg
cgtctactttaccaaccaaacgatcgtatgagctttagccgcattgtcaatgtgcccaca
agaggaattggtgcaactagtctggaaaagtttcttgtatggcagagccagtcgggcatg
gacattctctcagcacttgtcaatgctgagcagacagcaaccctgacctccagagcgcga
caggcgctgagcggactgggagaattattgcggcgcgtgcaggtaaaaagtgagttaggt
gttggtcctagcgagctgatagaggagctgttgtctgcgactggttatcgagacatgcta
cttgatggatcaccacaagccgaggagcgagaggcaaacctgggtgtattgatatctgat
gcgaaatcgtatgcatcgctcgacgactttttagaggaagtcgcgctgatgtcgagtgcc
gatgtaggtagcaccgagtctgtcgtgacgctcatgacacttcatgctgcaaaaggactc
gagtttcccgttgtttttatagtgggcatggaggaagggctgtttcccagtatgcgagca
ctcgaggaggggccgcgtcagctcgaggaagagcgtcggttatgttatgtcggcatgaca
cgtgcccgagaggagctctatctgctctatgccggaagccgtcttcagtttggacaacga
tcctacaccactccatcacgttttttagaggatatgggatatgtggccgccagtgtatct
ccctatcaacgatcaatgacgaacgaattcgacgagttttctttttcgcttgatattggg
gatagagtgcgatcgccacagtttggtcagggggaaatcattgatattgatgggctcgca
gtgaccgtttcgttcgatagcggccagacaaaaaaactaaatgtcgagtacgcgcgcctc
gaaaaatgctaa
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