Candidatus Saccharimonas aalborgensis: L336_0594
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Entry
L336_0594 CDS
T02673
Symbol
sigA
Name
(GenBank) RNA polymerase major sigma-43 factor (sigma-A)
KO
K03086
RNA polymerase primary sigma factor
Organism
saal
Candidatus Saccharimonas aalborgensis
Brite
KEGG Orthology (KO) [BR:
saal00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L336_0594 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saal03021
]
L336_0594 (sigA)
Transcription machinery [BR:
saal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L336_0594 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AGL62297
UniProt:
R4PX19
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All DBs
Position
590338..591321
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AA seq
327 aa
AA seq
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MANDDDQVIDQPEEELVQPDFEEPALDELLDEEEDTPEDVLNSGQYFDDISDDSVRLHLR
EIGKIPLLNAQEELELAQRVVAGDKKAKDKMAEANMRLVVSIAKRYSGRGLDFLDLIQEG
HTGLLRAVEKFDPDKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLLRTQR
RMTQELNREPTIDELAKELEMEPEKVEYVIKIKQDISSLDAGVGRDGEDEDSVLGDFIED
EDSTTPEESASNQLLKEQVQGVLSTLSEREQKIIKMRFGLENGKSHTLEEVGQEFAVTRE
RIRQIEAKALAKLRKHKDAKKLYEYLQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaacgatgatgaccaagtaatagaccagcccgaggaagagctagtacagccggat
ttcgaagaaccggctcttgatgaactactcgatgaagaagaggacacacccgaggacgtc
ctaaattccggtcagtattttgacgatatatctgacgactcagtacgactccacctacgt
gaaattggaaaaattccgctcctcaatgcccaagaagagctggaacttgcgcagcgtgtt
gtcgcaggtgacaagaaggcaaaagataagatggctgaggcaaatatgcgtctcgttgtc
tctattgcgaagcgctatagtgggcgaggtcttgatttcctcgaccttatccaagaaggc
cataccgggttactgcgcgctgttgaaaaatttgatcctgataagggttttaagtttagt
acctacgcgacgtggtggatccggcaagcgattactcgtgctattgctgatcaggcgcgg
acgattcgtatccctgtgcacatggtagagacaatcaacaagctcctccgtacgcagcgg
cggatgactcaggaattaaaccgtgagccaaccattgacgagcttgccaaagagcttgag
atggagccagaaaaagttgagtatgtcatcaaaatcaaacaagacatctcgagccttgat
gccggtgttggccgcgatggtgaagacgaagattcggtgcttggtgatttcattgaggac
gaagacagtacgactcccgaagaatcagcctcgaaccaattacttaaagagcaggttcaa
ggtgttctctcgacacttagtgaacgtgaacaaaagattatcaagatgcgatttggcctc
gagaatggcaaaagtcatacacttgaggaagtaggccaggagttcgccgtcacgcgcgag
cgaatccgacaaattgaagcgaaggccctagcgaaactccgtaagcacaaggatgcaaag
aagctctacgagtatctccagtag
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