Candidatus Saccharimonas aalborgensis: L336_0784
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Entry
L336_0784 CDS
T02673
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
saal
Candidatus Saccharimonas aalborgensis
Pathway
saal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L336_0784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saal03400
]
L336_0784
DNA repair and recombination proteins [BR:
saal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L336_0784
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L336_0784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AGL62486
UniProt:
R4PZ14
LinkDB
All DBs
Position
778554..779228
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AA seq
224 aa
AA seq
DB search
MSVERTRAIILRRTNYGEADRVLRMITPLGQRSVIAKGVRREKSKLAGGIELFAISDVVI
TGGRGELGILTSARLVQFYQHILNDYDRLQFGYESINLVAKASEMIDEPEWYGVLSEVYM
GLDVSTIPLQLIQTWFYVHYAELTGYELNLENDVTGQPLDEKKTYMYDSSERGLRPAEQG
DISADHIKLLRIIATKPIQTITQIGGVMSILPDCWLIARQHASV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgagcggacgcgggcaattatcctgaggagaacgaattatggtgaagcagat
cgcgtactcagaatgatcacaccgctcggccaacggtctgtgattgctaaaggtgtgaga
agagaaaaaagcaaattggccggaggaatcgagctatttgcgattagtgacgtcgttatt
acgggggggaggggcgagttggggatactgacttctgcgcggttggtgcagttttatcag
cacatattgaacgactacgatcgcctccagtttgggtacgaatcaataaatctggtagca
aaagcaagtgaaatgattgacgagccagagtggtatggtgtcctcagtgaggtgtatatg
gggcttgatgtgtcgacgattccgctgcagctcatccaaacgtggttttatgttcactat
gcagagttgacgggatatgagttgaatctcgagaatgatgttactggccagccgcttgat
gagaaaaaaacgtacatgtatgattcgtctgagcgtgggttgagaccggcggagcaggga
gatatttcggcagatcatatcaagttactgcgcatcattgcaaccaagccaattcaaacc
attacccagataggtggggtgatgagcattttacctgattgttggctgatcgcccgtcaa
catgcctcggtgtaa
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