Sphingomonas sp. AAP5: E2E30_02025
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Entry
E2E30_02025 CDS
T10507
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
saap Sphingomonas sp. AAP5
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saap03400
]
E2E30_02025 (addA)
Enzymes [BR:
saap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2E30_02025 (addA)
DNA repair and recombination proteins [BR:
saap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E2E30_02025 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QBM74665
LinkDB
All DBs
Position
439868..443314
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AA seq
1148 aa
AA seq
DB search
MSDTNTRRPLPILKDAQARASDPGGHVWLSASAGTGKTQVLTARVFRLLLTGVDPGAILC
LTFTKAGAAEMAGRIGDRLAAWVRMPEPELVSDLQALGEDPSPALRARARTLFARVLDSP
GGGIRIQTIHGFCQSLLAAFPVEAGLVPGFRPIEAREEAVMARDALAEMLVAAETEGREA
PVATVGALSLRLGEGEAEKFLLACARAPAAMAELPMGEGVRPFIRRALDLPQGEIEAEIT
AACSDDAFDVDAVARLAAANRAWGTATGGNHADVAECWVEADPAMRAQMLGDLIGVPFTA
KREPRKYSPKLLAADPEYADLAIEIGEACAHLLGLRERAAYADLLADALSVGRDYAATYE
RAKRRLGAVDFDDLIRATISLLGQPGMGEWVRYKLDQATDHVLIDEAQDTNPAQWAIIHA
LVEEFFAGEGAQDARVRTLFTVGDFKQAIFGFQGTHPLYFAAAEKKFGTLARDAWEADDE
QRRQTGTMRARPWHRLSLTQSFRSTRPVLEFVDAAIEALPDPGLGAIADREVHASEVPGP
GTVTLWPLVVAGGSDEDEESWISDSTRELARQIARTIKGWIGTLMLESKGRTLRPEDIMI
LVKRRGELASLIVARLYAEGVPVAGVDRLRLNAPLSVQDLLAAIRFVLQPADDLSLAALL
VSPLIGWSQERLMLAAPPRTGSLWRHISATEPREDIAPLFAMLARADIATPYQFLEELLS
GPLGARRNLVRRLGQEARDPIEELLSAALDFESLGTPSLQRFLDWFDRGEVEIKRDPSAP
LDAVRVMTAHGAKGLQAPLVILADAAVDPTRSPRSTLNWRAGDMANELPVIRPRKGEATG
PLAVLVEETAARDLEEHWRLFYVAATRAEERLVIAGSVGPRAQGIAPEQSWYAAADRAMA
ALGIAGEGARDFAGREPQRPVAPDRRAARGAATHEPVPDWALRPAPQEARPPRPLAPSSL
GEDAVADAPPTPTMRAAAERGRLIHALFERLPAVAPELRAAAADRWLAQAGAVEDAKDRA
RIIAPVLAVLDDPTLAELFGPNALAEAPIAAVLPDGFVVSGTVDRLLVTPELIRVVDFKT
GRAVPAGLADVPAYHLKQMAAYVAALAVIFPQRRVEAALLYTSGPTLHALPDDLLAAHKP
GFAGVEQS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccaacacccgccgcccgctccccatcctcaaggatgcgcaggcgcgcgcc
agcgaccccggcgggcacgtctggctctccgcatcggccggcactggcaagacgcaagtg
ctcaccgcgcgcgtgttccggctgctgctcaccggcgtcgatccgggcgcgatcctgtgt
ctcaccttcaccaaggcgggtgctgccgagatggcggggcggatcggcgatcggctcgcc
gcctgggtgcggatgcccgagcccgagctcgtctccgacctgcaggcgctcggcgaggat
ccgtcgccggcgctccgcgcgcgagcacgcacgctgttcgcgcgcgtgctcgattcgccg
ggcggcggaatccgcatccagacgatccacggtttctgccagagcctgctcgccgccttc
ccggtcgaggcggggctcgtccccggcttccgtccgatcgaggcgcgcgaggaagcggtg
atggcgcgcgatgcgctcgccgagatgctcgtcgcggctgagaccgaggggcgcgaggca
cctgtcgcgacggtcggcgcgctgagcttgcggctcggcgagggcgaggcggagaagttc
ctgctcgcctgcgcgcgtgcacccgcggcgatggccgagttgccgatgggggagggcgtg
cggcccttcatccgccgcgcgctcgatttgccgcaaggcgagatcgaggcggagatcacc
gccgcatgcagcgatgatgcgttcgatgtcgatgcggtcgcgcggctcgccgccgccaac
cgggcctggggcactgctaccggcgggaaccatgccgatgtcgccgaatgctgggtcgag
gccgaccccgcgatgcgcgcgcagatgctcggcgatctgattggtgtacccttcaccgcg
aagcgcgagccgcgcaaatattcgcccaagctgctcgctgccgatccggagtatgccgat
ctcgcgatcgagatcggcgaggcctgcgcgcatctgttgggcctgcgcgagcgcgctgcg
tatgccgatctgctcgccgatgcgctgtcggtcgggcgcgactatgcggcgacgtatgag
cgcgccaagcgccggctcggcgcggtcgatttcgacgatctgatccgcgcgacgatcagc
ctgctcggccagcccgggatgggcgaatgggtgcgctacaagctcgatcaggcgaccgac
catgtgctgatcgacgaagcgcaggacaccaatcccgcgcaatgggcgatcatccatgcg
ctggtcgaggagttcttcgcgggcgaaggcgcgcaggatgcccgcgtccgcacgctgttc
accgtcggcgacttcaagcaggcgatcttcggtttccaggggacgcacccgctctatttc
gctgccgccgaaaagaagttcgggacgctcgcacgcgatgcgtgggaggccgatgacgag
cagcgccgccagaccggcacgatgcgcgcgcgtccgtggcaccggctgtcgctgacgcaa
tcgttccgctcgacgcggccggtactcgaattcgtcgatgccgcgatcgaggcgctgccc
gatcccggattgggcgcgatcgccgaccgtgaggtgcatgcgagtgaagtgccggggccg
ggcaccgtcacgctgtggccgctcgtcgtcgcgggcgggagcgacgaggacgaggagagc
tggatctccgattcgacgcgcgaactcgcgcgccagatcgcgcggacgatcaaggggtgg
atcggcacgttgatgctcgagagcaaggggcgcacgctgcggcccgaggacatcatgatc
ctcgtcaagcggcgcggcgagctcgcctcgctgatcgtcgcgcggctctatgccgagggc
gtgccggtcgcgggcgtggatcgcttgcggctcaatgccccgttgtcggtgcaggatctg
ctcgccgcgatccgcttcgtgctgcagccggccgacgatctgtcgctcgccgccttgctt
gtctcgccgctgatcgggtggagccaggagcggctgatgctggcggcaccgccgcgcacc
ggcagcctgtggcggcatatctcggcgaccgaaccgcgcgaggacatagcgccgctgttc
gcgatgctcgcgcgcgccgacatcgcgacgccgtaccagttcctcgaagagctgctgtcg
ggcccgctcggcgcgcggcgcaatctcgttcgacggctggggcaggaagcgcgcgatccg
atcgaggaactgctcagcgccgcgctcgatttcgaatcgctcggcacgccgtcgctgcag
cgcttcctcgactggttcgatcgcggtgaggtcgagatcaagcgcgatccgtccgcgccg
ctcgatgcggtgcgggtgatgaccgcgcatggggcgaaggggctgcaggcgccgctggtg
atcctcgccgatgcggcggtcgatccgacgcgctcgccgcgttcgacgctcaactggcgc
gcgggcgacatggcgaacgaactgccggtgatccgcccgcgcaagggcgaggcgaccggg
ccgctcgccgtgctggtcgaggaaaccgcggcgcgcgatctcgaggagcattggcggctg
ttctatgtcgcggcgacgcgcgccgaggagcggctggtgatcgccggatcggtcggtccg
cgcgcgcaagggatcgcgcccgagcagagctggtacgccgccgccgaccgcgcgatggcc
gcgctcgggatcgcgggcgagggcgcgcgcgactttgccgggcgtgagccgcaacgtccc
gtcgcgcccgatcgccgtgcggcgcgcggggcagcgacgcacgagcccgtccccgactgg
gcgctgcggcccgcaccgcaggaagcccgcccgccgcgtccgctcgcgccgtcgtcgctc
ggcgaggacgcggtcgccgatgcgccgccgacgccgacgatgcgcgccgccgccgagcgc
gggcggttgatccatgcgctgttcgaacgcttgcccgcggtcgcgcccgagctgcgggcg
gcggcggcggatcgctggcttgcgcaggcgggcgcggtcgaggatgccaaggaccgcgcg
cggatcatcgcgccggtgctggcggtgctcgatgatccgacgctggccgagctgttcggc
ccgaacgcgctcgccgaggcgccgatcgccgcggtattgcccgacgggttcgtcgtgtcg
gggacggtcgatcggctgttggtgacccccgaactgatccgcgtggtcgatttcaagacc
gggcgcgcggtgccggcggggcttgccgacgtgcccgcctatcatctcaagcagatggcg
gcgtatgtcgccgcgctcgcggtgatcttcccgcagcgccgcgtcgaggcggcgttgctc
tacaccagcgggccgacgctccacgccctgcccgacgatctactcgccgcgcacaagcca
ggctttgcgggcgtggagcaaagctag
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