Sphingomonas sp. AAP5: E2E30_02175
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Entry
E2E30_02175 CDS
T10507
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap03018
RNA degradation
Brite
Enzymes [BR:
saap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E2E30_02175
Messenger RNA biogenesis [BR:
saap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2E30_02175
Ribosome biogenesis [BR:
saap03009
]
Prokaryotic type
rRNA helicases
E2E30_02175
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Other DBs
NCBI-ProteinID:
QBM74692
UniProt:
A0A4P6X7M6
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Position
469641..471356
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AA seq
571 aa
AA seq
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MPFSHLPTLLAEALSARGYEAPTPVQAAVIEPEAEGRDVIVSAQTGSGKTVAFGLAIAPQ
LLTEDGLLPPPRAPLALAIAPTRELALQVSRELEWLYGKAGARISTCVGGMDASRERRSL
AHGTHIVVGTPGRLRDHIERGALDLSNLKAVILDEADEMLDMGFREDLELILDASPSERR
TLLFSATMPKSIVALAKRYQKDALRISTVGEDRGHGDIEYQAVTVAPADIENAVVNLLRL
HEAETAMLFCATRDNVRHLHAGLIERGFAAVALSGEHSQNERNAAMQALRDKRARVCVAT
DVAARGIDLPSLSLVVHVELPRDAETMQHRSGRTGRAGKKGTAILIVPYQRKRRVEMMLR
GARIAVEWMNAPTVDDIRKADKSRLMTMLMEDVEVDEDDRALAAQLLEKKTPEDIAAALV
RSYRARMPAPEEMIEASGSAPREAGKEHHREGFDDIVWFRMDIGRRQNADPRWILPLICR
RGHITKNEVGAIRIAANETMFQVPSGIAGKFMAAVKRTAGEEAEGGVQFEQVQGGPVEAE
RSPRRANGPAPVRHQPRPTLRPGGPNKRPQR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcccttttcacacctccccacgcttcttgccgaagcgctctccgcccgtggctatgaa
gccccgactcctgtccaggccgccgtcatcgagcccgaggccgaaggccgcgacgtcatc
gtctcggcgcagaccgggtcgggcaagaccgtcgcattcggcctcgccatcgcgccgcag
ctgctgaccgaggacggcctgctcccgccgccgcgcgcaccgctcgcgctcgcgatcgcg
ccgacgcgcgaactcgcgctgcaggtcagccgcgagctggaatggctctacggcaaggcc
ggcgcgcgcatttcgacttgcgtcggcggcatggacgcgtcgcgcgagcgccgcagcctc
gcgcacggcacgcatatcgtggtcggcacgccgggccgtctgcgcgaccatatcgagcgc
ggcgcgctcgatctgtcgaacctcaaggcggtcatcctcgacgaagccgacgagatgctc
gacatgggcttccgcgaagatctcgagctgatcctcgacgcttcgccgtccgagcgccgc
acgctgctcttctcggcgacgatgcccaagtcgattgtcgcgctcgccaagcgctaccag
aaggatgcgttgcgcatctcgaccgtcggtgaggaccgtggtcatggcgacatcgaatat
caggcggtgactgtggcgccggccgatatcgagaatgctgtcgttaatctgctccgcctc
cacgaagccgagaccgcgatgctgttctgcgcgacgcgcgacaatgtccgtcatcttcac
gccgggctgatcgagcgcgggttcgccgcggtcgctctctcgggcgagcatagccagaac
gagcgcaacgccgcgatgcaggcgctgcgcgacaagcgtgcgcgtgtctgcgtcgcgacc
gacgtcgccgcgcgcgggatcgatctgccctcgctcagcctcgtcgttcacgtcgagctg
ccgcgcgatgccgagacgatgcagcatcgctcgggccgtaccggtcgcgcgggcaagaag
ggcaccgcgatcctgatcgtgccgtatcagcgcaagcgccgcgtcgagatgatgctgcgc
ggcgcgcggatcgcggtcgagtggatgaacgcgccgaccgtcgacgacatccgcaaggcc
gacaagtcgcggctgatgacgatgctgatggaagacgtcgaagtcgacgaggacgatcgc
gcattggcggcacagctgctcgagaagaagacccccgaggatatcgcggcggcgctggtg
cgcagctatcgcgcgcggatgccggcgcccgaggaaatgatcgaggcgagcggttccgcg
ccgcgcgaggcgggcaaggagcatcaccgcgagggcttcgatgacatcgtctggttccgc
atggacatcgggcgtcgccagaatgccgatccgcgctggatcctgccgctgatctgtcgt
cgcgggcatatcaccaagaacgaagtcggcgcgatccgcatcgccgccaacgagacgatg
ttccaggtgccgagcggcatcgcgggcaagttcatggcggcggtaaagcgcaccgccggc
gaggaagccgaaggcggcgtgcaattcgagcaggtccaaggcggcccggtcgaggccgag
cgcagcccgcggcgtgccaatgggccggcaccggtacggcatcagccgcggccgacattg
cggcccggtgggccgaacaagcgcccgcaacgctaa
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