Sphingomonas sp. AAP5: E2E30_02685
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Entry
E2E30_02685 CDS
T10507
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
saap Sphingomonas sp. AAP5
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saap03032
]
E2E30_02685
03400 DNA repair and recombination proteins [BR:
saap03400
]
E2E30_02685
Enzymes [BR:
saap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E2E30_02685
DNA replication proteins [BR:
saap03032
]
Prokaryotic type
DNA Topoisomerases
E2E30_02685
DNA repair and recombination proteins [BR:
saap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E2E30_02685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QBM74783
UniProt:
A0A4P6X8Q3
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All DBs
Position
complement(587379..588383)
Genome browser
AA seq
334 aa
AA seq
DB search
MTKLSYHDDSDPGITRKAVRHGWGYYDVDGARITDRDEIDRLNAIGLPPAYRDAWYCPSP
TGHIQAVGWDEKGRKQYRYHVDFRETQEAAKYELCAPFGHALPKLRARVAADLAKRGIGK
DTAVAAVVRLLDLGKVRIGNEGYVKANKSFGATTLRKRHAALKGQSLKLQFKAKSGKLRV
LTITDGSLSRFVKRCQDLPGQHLFRWVDSDGEAHPVTSSDVNAYIREAMGADFTAKHFRT
WSASVLAFEALAGATHDISLKTMLLPVSEALGNTPAIARKSYVHPALLALAKDGQSAFRE
TLRLPRSTQHLSRAERGLLAFLEQGTPPSSAKAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctttcttaccacgacgacagtgaccctggtattacacgcaaggccgtgcgc
catggctggggctattacgatgtcgatggtgcgcgcatcaccgatcgcgacgagatcgac
cggctgaacgcgatcggcctgccccccgcctatcgcgatgcatggtactgcccgagcccg
acgggccatatccaggcggtcggctgggacgagaagggccgcaagcaatatcgctaccac
gtcgatttccgcgagacgcaggaagcggccaagtatgagctgtgcgcgccgttcggccat
gcgctgcccaagctgcgcgcacgcgtcgccgccgacctcgccaagcgcgggatcggcaag
gataccgcggtcgcggcagtcgtccggctgctcgatctcggcaaggtccgcatcggcaac
gaaggctatgtgaaggcgaacaagagcttcggcgcgaccaccttgcgcaagcgccacgcc
gcgctgaagggccagtcgctgaaactccagttcaaggccaagtcgggcaagctgcgcgtg
ctgacgatcaccgacggatcgctcagccgcttcgtcaagcgctgccaggatctccccggg
cagcacctgttccgctgggtcgacagcgacggcgaggcacacccggtcacctcgtccgat
gtcaacgcctatatccgcgaggcgatgggcgccgatttcaccgcgaagcatttccgcaca
tggagcgcgagcgtgctcgcgttcgaggcgctcgccggcgcgacgcacgacatcagcctc
aagaccatgttgctccccgtcagcgaagcgctcggcaacacgcccgcgatcgcgcgcaaa
tcctacgtccaccccgctttgctcgcgctcgccaaggacggacagtccgcgtttcgcgaa
acactccgcctgccgcgcagcacgcagcatctgagccgcgccgaacgcggcttgctcgct
ttcctcgaacagggcacgccgccgtcttccgcgaaagccgcctga
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