Sphingomonas sp. AAP5: E2E30_03340
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Entry
E2E30_03340 CDS
T10507
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
saap Sphingomonas sp. AAP5
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saap03009
]
E2E30_03340 (rimO)
Enzymes [BR:
saap01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E2E30_03340 (rimO)
Ribosome biogenesis [BR:
saap03009
]
Prokaryotic type
ribosomal protein modification factors
E2E30_03340 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
QBM74900
UniProt:
A0A4V1ACF2
LinkDB
All DBs
Position
complement(733016..734347)
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AA seq
443 aa
AA seq
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MATTLPSPPKIGMVSLGCPKNLVDSERILTKLRSDGYAMSPDYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGKEAEMIRAKFPGILAVTGAHQYEEVVGAVHEAAPM
PPSAFLNLVPDSGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEK
LIEAGTKELLVISQDTSAYGVDIRHQPRMWHGEEVRAHMTDLSRELGKLGAWVRLHYVYP
YPHVDQVIPLMAEGLILPYLDIPFQHASRNVLKLMKRPANETKVLERIKTWRTIAPDIAI
RSTFVVGFPGETEDDFAYLMEWLEEAQLDRVGAFRFEPVEGAAANDLPNHVPEEIKEERY
ARLMELTARISADKLQAKVGRTLDVIIDAVDEEGGATGRSKADAPEIDGEVFLRDAGHLK
QGDIVAVSIEDADEHDLYGVPLA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacactcccctccccgccgaaaatcggcatggtctcgctcggctgtcccaag
aatctggtcgatagcgagcggatcctgaccaagctgcgcagcgatggctatgcgatgtcg
cccgattatgccggcgccgacgtcgtactcgtcaacacctgcggcttcctcgattcggcc
aaggaagaatcgctcgaagcgatcggcgaggcgatcgccgagaacggccgcgtcatcgtc
accggctgcatgggcaaggaagcggagatgatccgcgccaaattccccggcatcctcgcc
gtgaccggcgcgcatcagtacgaagaagtcgtcggcgcagtccacgaagcggccccgatg
ccgccgagcgcgttcctcaacctcgttcccgacagcggcctcaagctgaccccgcgccac
tacagctatctgaagatcagcgaaggctgcaaccaccgctgcagcttctgcatcatcccc
tccttgcgcggcgacctcgtcagccgccgccccgacgcgatcctgcgcgaagccgagaag
ctgatcgaagccggcaccaaggaattgctggtgatcagccaggacacctcggcctacggc
gtcgatatccgccaccagccgcggatgtggcacggcgaagaagtccgcgcgcacatgacg
gatctgtcgcgcgaactcggcaagctcggcgcctgggtgcgcctgcactacgtctacccc
tacccgcatgtcgaccaggtcatcccgctgatggccgaggggctgatcctcccctatctc
gacatcccgttccagcacgccagccgcaacgtgctcaagctgatgaagcgcccggcgaac
gaaaccaaggtgctcgaacgcatcaagacttggcgcacgatcgcgcccgacatcgcgatc
cgctcgaccttcgtcgtcggtttccccggcgagaccgaggacgatttcgcctatctgatg
gagtggctcgaggaagcgcaactcgaccgcgtcggcgccttccgcttcgagccggtcgaa
ggtgctgccgcgaacgacctccccaaccacgtccccgaagagatcaaggaagagcgctat
gcccgcctgatggaactcaccgcgcgcatctcggccgacaagctccaggccaaggtcggc
cgcacgctcgacgtcatcatcgacgcggtcgatgaagagggcggcgccaccggccgctcg
aaggccgacgcgcccgagatcgacggcgaggtcttcctgcgcgacgccggccacctcaag
cagggcgacatcgtggcggtcagcatcgaggatgccgacgagcacgacctgtacggcgtg
ccgctcgcctga
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