Sphingomonas sp. AAP5: E2E30_08815
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Entry
E2E30_08815 CDS
T10507
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2E30_08815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saap03019
]
E2E30_08815
Messenger RNA biogenesis [BR:
saap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E2E30_08815
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QBM75864
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Position
1921710..1922189
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AA seq
159 aa
AA seq
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MTDPTTLPYRPCAGIMLLNADGLVFVGQRIDAEVEAWQMPQGGIDDGEDPEATALRELGE
ETGIASKHVELIAAAPHELFYDLPEELVGRVWKGKWRGQRQRWFLYRFLGSDADIDIATE
HPEFKSWQWIRPETLPDVIVPFKKTLYEDVLAAFAPHLS
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccaccaccctgccttatcgcccctgcgccggaatcatgctgctcaacgcc
gacggcctcgtcttcgtcggccagcggatcgatgccgaagtcgaagcgtggcagatgccg
caaggcgggatcgacgatggcgaggaccccgaggccaccgctttgcgcgagctcggcgag
gaaaccggcatcgcatctaagcatgtcgaactgatcgccgccgcgccgcacgaactgttc
tacgatctgcccgaagagctcgtcggccgcgtctggaaaggcaagtggcgcgggcagcgg
cagcgctggttcctctaccgtttccttggcagcgacgccgatatcgacatcgcgaccgag
catcccgagttcaaatcctggcaatggatccgccccgagacgctccccgacgtcatcgtc
cccttcaagaagacgctgtacgaggacgtcctcgctgccttcgcgccgcatctgtcctga
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